RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PTBP1P26599 531 aaKnown RBP eCLIP11.34□□□□□ -0.59
NUP50-209ENST00000432340 TFPI2P48307 235 aa11.34□□□□□ -0.59
NUP50-209ENST00000432340 FLOT2Q14254 428 aa11.34□□□□□ -0.59
NUP50-209ENST00000432340 Q499Y3 187 aa11.34□□□□□ -0.59
NUP50-209ENST00000432340 OR51E2Q9H255 320 aa11.34□□□□□ -0.59
NUP50-209ENST00000432340 IGLV11-55A0A075B6I3 123 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 MFSD2BA6NFX1 497 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 RPA2P15927 270 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 SRMP19623 302 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 TTC23Q5W5X9 447 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 BSCL2Q96G97 398 aaPredicted RBP11.33□□□□□ -0.6
NUP50-209ENST00000432340 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 TMEM59Q9BXS4 323 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 FAM107BQ9H098 131 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 C12orf4Q9NQ89 552 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 TMEM14BQ9NUH8 114 aa11.33□□□□□ -0.6
NUP50-209ENST00000432340 MRPS7Q9Y2R9 242 aaKnown RBP11.33□□□□□ -0.6
NUP50-209ENST00000432340 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 GTF2A1P52655 376 aaPredicted RBP11.32□□□□□ -0.6
NUP50-209ENST00000432340 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 YIF1BQ5BJH7 314 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 VN1R17PQ8TDU5 208 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 Q96MT0 163 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 SMPXQ9UHP9 88 aa11.32□□□□□ -0.6
NUP50-209ENST00000432340 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 A0A1B0GW64 132 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 ERICH4A6NGS2 130 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 POLR2IP36954 125 aaKnown RBP11.31□□□□□ -0.6
NUP50-209ENST00000432340 RPS27AP62979 156 aaKnown RBP11.31□□□□□ -0.6
NUP50-209ENST00000432340 TMPRSS11AQ6ZMR5 421 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 TMEM116Q8NCL8 245 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 OR4A4PQ8NGN8 299 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 OR10J5Q8NHC4 309 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 GIMAP1Q8WWP7 306 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 RNF2Q99496 336 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 SLC29A1Q99808 456 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 CENPOQ9BU64 300 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 Q9N2K0 584 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 PRELID3BQ9Y3B1 194 aa11.31□□□□□ -0.6
NUP50-209ENST00000432340 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
NUP50-209ENST00000432340 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 TCRBV3S1A0A5B6 114 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 TRDCB7Z8K6 153 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
NUP50-209ENST00000432340 DIRAS3O95661 229 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 IL6RP08887 468 aaPredicted RBP11.3□□□□□ -0.6
NUP50-209ENST00000432340 SPART-AS1P0CW21 52 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 AREGP15514 252 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 DUTP33316 252 aaKnown RBP11.3□□□□□ -0.6
NUP50-209ENST00000432340 PLA2G7Q13093 441 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 ATP6AP1Q15904 470 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 OR2G6Q5TZ20 316 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 Q5VSD8 79 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 ORAI1Q96D31 301 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 ATG101Q9BSB4 218 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 ARL2BPQ9Y2Y0 163 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 X6R8D5 127 aa11.3□□□□□ -0.6
NUP50-209ENST00000432340 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 KBTBD11O94819 623 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 CALB2P22676 271 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 DEFB131AP59861 70 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 HSP90B2PQ58FF3 399 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 ORC6Q9Y5N6 252 aa11.29□□□□□ -0.6
NUP50-209ENST00000432340 IGKV3-7A0A075B6H7 116 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 TRAV2A0A0B4J234 112 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 OR2T8A6NH00 312 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
NUP50-209ENST00000432340 CHEK1O14757 476 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 EIF4EP06730 217 aaKnown RBP11.28□□□□□ -0.6
NUP50-209ENST00000432340 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
NUP50-209ENST00000432340 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
NUP50-209ENST00000432340 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 OR6M1Q8NGM8 313 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 SRSF8Q9BRL6 282 aaKnown RBP11.28□□□□□ -0.6
NUP50-209ENST00000432340 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
NUP50-209ENST00000432340 FCGR3BO75015 233 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 BPNT1O95861 308 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 GNB3P16520 340 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 HTR2CP28335 458 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.61
NUP50-209ENST00000432340 LEMD1Q68G75 181 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 LYPD1Q8N2G4 141 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 GGHQ92820 318 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 AIFM2Q9BRQ8 373 aa11.27□□□□□ -0.61
NUP50-209ENST00000432340 URM1Q9BTM9 101 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms