RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RNF126Q9BV68 326 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 MS4A7Q9GZW8 240 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-206ENST00000431390 MBD2Q9UBB5 411 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 IGHV3-72A0A0B4J1Y9 119 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 H0YIZ8 118 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 DEDDO75618 318 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 LGALS7P47929 136 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 RPS16P62249 146 aaKnown RBP14.67□□□□□ -0.06
HMGN1-206ENST00000431390 SSX2Q16385 188 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 AARDQ4LEZ3 155 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 CYB5R2Q6BCY4 276 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 OR4A47Q6IF82 309 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 VKORC1L1Q8N0U8 176 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 AJUBAQ96IF1 538 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 BET1LQ9NYM9 111 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 CACFD1Q9UGQ2 172 aa14.67□□□□□ -0.06
HMGN1-206ENST00000431390 LSM5Q9Y4Y9 91 aaKnown RBP14.67□□□□□ -0.06
HMGN1-206ENST00000431390 ATRQ13535 2644 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 SRRM4A7MD48 611 aaKnown RBP14.66□□□□□ -0.06
HMGN1-206ENST00000431390 IL6RP08887 468 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-206ENST00000431390 OR9G9P0C7N8 305 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 CXorf66Q5JRM2 361 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-206ENST00000431390 ZNF546Q86UE3 836 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 FOXRED2Q8IWF2 684 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 PUSL1Q8N0Z8 303 aaKnown RBP14.66□□□□□ -0.06
HMGN1-206ENST00000431390 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 GRPEL2Q8TAA5 225 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 VSTM2AQ8TAG5 236 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 OR5AC2Q9NZP5 309 aa14.66□□□□□ -0.06
HMGN1-206ENST00000431390 SONP18583 2426 aaKnown RBP14.66□□□□□ -0.06
HMGN1-206ENST00000431390 SAA1P0DJI8 122 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-206ENST00000431390 DYNAPQ8N1N2 210 aa14.65□□□□□ -0.06
HMGN1-206ENST00000431390 OR4A16Q8NH70 328 aa14.65□□□□□ -0.06
HMGN1-206ENST00000431390 RCL1Q9Y2P8 373 aaKnown RBP14.65□□□□□ -0.06
HMGN1-206ENST00000431390 VENTXO95231 258 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 IGLV2-23P01705 113 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 UBE2KP61086 200 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 RELBQ01201 579 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 VMA21Q3ZAQ7 101 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 ZNF429Q86V71 674 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 C9orf62Q8N4C0 152 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 OR4A5Q8NH83 315 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 C17orf50Q8WW18 174 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 DCUN1D4Q92564 292 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 HSPB7Q9UBY9 170 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 TNFSF18Q9UNG2 199 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 E5RGE8 158 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 WRBO00258 174 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 ARPC5O15511 151 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 AVPP01185 164 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 IGHV4-38-2P0DP08 117 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 PVALBP20472 110 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-206ENST00000431390 BPIFB3P59826 476 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 POLR2GP62487 172 aaKnown RBP eCLIP14.64□□□□□ -0.07
HMGN1-206ENST00000431390 TNFRSF9Q07011 255 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 RBMXL1Q96E39 390 aaKnown RBP14.64□□□□□ -0.07
HMGN1-206ENST00000431390 TSNAXQ99598 290 aaKnown RBP14.64□□□□□ -0.07
HMGN1-206ENST00000431390 NSG2Q9Y328 171 aa14.64□□□□□ -0.07
HMGN1-206ENST00000431390 C15orf61A6NNL5 157 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 UPK2O00526 184 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 RBMXL2O75526 392 aaKnown RBP14.63□□□□□ -0.07
HMGN1-206ENST00000431390 MED6O75586 246 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 KBTBD11O94819 623 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 FGF2P09038 288 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 KLF17Q5JT82 389 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-206ENST00000431390 RUSC1-AS1Q66K80 236 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 LAMTOR1Q6IAA8 161 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 OR52E5Q8NH55 327 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 C11orf1Q9H5F2 150 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 PRNDQ9UKY0 176 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-206ENST00000431390 CUBNO60494 3623 aa14.63□□□□□ -0.07
HMGN1-206ENST00000431390 TRAV3A0A0B4J244 114 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 SYNGR2O43760 224 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 NXPH3O95157 252 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 SPDEFO95238 335 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 MOSP00540 346 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 BRS3P32247 399 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 OR2B8PP59922 312 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 EBI3Q14213 229 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 ZNF345Q14585 488 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 LGALSLQ3ZCW2 172 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-206ENST00000431390 PDLIM3Q53GG5 364 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-206ENST00000431390 TEX45Q8NA69 505 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 INO80EQ8NBZ0 244 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-206ENST00000431390 OR2T10Q8NGZ9 312 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 TMEM167AQ8TBQ9 72 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 RITA1Q96K30 269 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 RAB40CQ96S21 281 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 QTRT1Q9BXR0 403 aaKnown RBP14.62□□□□□ -0.07
HMGN1-206ENST00000431390 MFFQ9GZY8 342 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 MAGT1Q9H0U3 335 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 TMEM14BQ9NUH8 114 aa14.62□□□□□ -0.07
HMGN1-206ENST00000431390 ABCA1O95477 2261 aa14.61□□□□□ -0.07
HMGN1-206ENST00000431390 IGHV3OR16-10A0A075B7F0 116 aa14.61□□□□□ -0.07
HMGN1-206ENST00000431390 RNF222A6NCQ9 220 aa14.61□□□□□ -0.07
HMGN1-206ENST00000431390 L7N2F9 121 aa14.61□□□□□ -0.07
HMGN1-206ENST00000431390 CHST1O43916 411 aa14.61□□□□□ -0.07
HMGN1-206ENST00000431390 SSSCA1O60232 199 aa14.61□□□□□ -0.07
HMGN1-206ENST00000431390 OR2F2O95006 317 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms