RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 MORN2Q502X0 79 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 SPINK9Q5DT21 86 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 TPRX1Q8N7U7 411 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 FAM169BQ8N8A8 192 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 SARAFQ96BY9 339 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 GNG12Q9UBI6 72 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 AHCTF1Q8WYP5 2266 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 KIAA2026Q5HYC2 2103 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 DOCK7Q96N67 2140 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 PRR33A8MZF0 331 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
USP4-205ENST00000431357 NPPCP23582 126 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
USP4-205ENST00000431357 RTP5Q14D33 572 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 LINC01551Q86U37 167 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 ELOVL1Q9BW60 279 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 MSL2Q9HCI7 577 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 HEYLQ9NQ87 328 aaPredicted RBP9.38□□□□□ -0.91
USP4-205ENST00000431357 PLSCR4Q9NRQ2 329 aa9.38□□□□□ -0.91
USP4-205ENST00000431357 IGHV2OR16-5A0A0B4J2B6 119 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 SRRM5B3KS81 715 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 F2RL2O00254 374 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CFHR2P36980 270 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 GNB1P62873 340 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CFAP161Q6P656 301 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 VWA1Q6PCB0 445 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 ZNF664Q8N3J9 261 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 C9orf106Q8NAJ2 232 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 S1PR3Q99500 378 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 SEPSECSQ9HD40 501 aaKnown RBP9.37□□□□□ -0.91
USP4-205ENST00000431357 TRGV8A0A0C4DH27 118 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 M0R1X1 148 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 GALR2O43603 387 aaPredicted RBP9.37□□□□□ -0.91
USP4-205ENST00000431357 PROP1O75360 226 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CXorf1O96002 111 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 TFF1P04155 84 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 STAG3L2P0CL84 134 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 STAG3L3P0CL85 134 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CCKARP32238 428 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 EDDM3BP56851 147 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 ERVFC1-1P60608 527 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 FOXL1Q12952 345 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 EDDM3AQ14507 147 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 P2RY6Q15077 328 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CST9LP1Q5W188 147 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CORO2AQ92828 525 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 TMEM204Q9BSN7 226 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 FUT9Q9Y231 359 aa9.37□□□□□ -0.91
USP4-205ENST00000431357 CFAP54Q96N23 3096 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 TRAV38-1A0A0B4J264 116 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 IGHV1-18A0A0C4DH31 117 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 PRSS46E5RG02 174 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 K7EP13 123 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 GZMBP10144 247 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 PLA2G5P39877 138 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 RAB7AP51149 207 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 LINC00205P59089 165 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 RELBQ01201 579 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 LTC4SQ16873 150 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 DCTN5Q9BTE1 182 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 FZR1Q9UM11 496 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
USP4-205ENST00000431357 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
USP4-205ENST00000431357 IGKV1D-17A0A075B6S4 117 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 TRAV17A0A0B4J275 112 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 AHRRA9YTQ3 701 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 GFRA3O60609 400 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 NDUFB4O95168 129 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 PPBPP02775 128 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 ATP5G3P48201 142 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 CNN1P51911 297 aaKnown RBP9.35□□□□□ -0.91
USP4-205ENST00000431357 HOXA4Q00056 320 aaPredicted RBP9.35□□□□□ -0.91
USP4-205ENST00000431357 FAM78BQ5VT40 261 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 OR2Z1Q8NG97 314 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 PROCRQ9UNN8 238 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 TECTAO75443 2155 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 MDFIC2A0A1B0GVS7 189 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 M0R296 226 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 CRYAAP02489 173 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 EGR1P18146 543 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 CCL11P51671 97 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 UBE2G2P60604 165 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 CLEC12BQ2HXU8 276 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
USP4-205ENST00000431357 GCSAMLQ5JQS6 135 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 BHLHA15Q7RTS1 189 aaPredicted RBP9.35□□□□□ -0.91
USP4-205ENST00000431357 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
USP4-205ENST00000431357 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 MGST2Q99735 147 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 GGTLC1Q9BX51 225 aa9.35□□□□□ -0.91
USP4-205ENST00000431357 IFI27L2Q9H2X8 130 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms