RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 EXTL2Q9UBQ6 330 aa7.59□□□□□ -1.19
HDAC6-207ENST00000430858 IGHV4OR15-8A0A075B7B6 117 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 A0A087WW49 117 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 OVOL1O14753 267 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 NQO2P16083 231 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 RPL5P46777 297 aaKnown RBP7.58□□□□□ -1.2
HDAC6-207ENST00000430858 TMBIM6P55061 237 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 TAS2R31P59538 309 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 TSPAN5P62079 268 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 LPCAT3Q6P1A2 487 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 SLC25A42Q86VD7 318 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 CLVS1Q8IUQ0 354 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-207ENST00000430858 CMTM1Q8IZ96 169 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 ADAD2Q8NCV1 583 aaKnown RBP7.58□□□□□ -1.2
HDAC6-207ENST00000430858 OR51H1Q8NH63 302 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 DCUN1D4Q92564 292 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 DLX4Q92988 240 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-207ENST00000430858 USMG5Q96IX5 58 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 PLEKHA2Q9HB19 425 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 RANGRFQ9HD47 186 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-207ENST00000430858 BET1LQ9NYM9 111 aa7.58□□□□□ -1.2
HDAC6-207ENST00000430858 WI2-2373I1.2A0A1W2PRP0 233 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 FAM223BA6NKX1 122 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 K7EIL1 84 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 GPR31O00270 319 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 PGLYRP1O75594 196 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-207ENST00000430858 APELAP0DMC3 54 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 ZP3P21754 424 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 S100GP29377 79 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 RPL27AP46776 148 aaKnown RBP7.57□□□□□ -1.2
HDAC6-207ENST00000430858 SLURP1P55000 103 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 RPL8P62917 257 aaKnown RBP7.57□□□□□ -1.2
HDAC6-207ENST00000430858 DCTN2Q13561 401 aaKnown RBP7.57□□□□□ -1.2
HDAC6-207ENST00000430858 SPCS2Q15005 226 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 POU2AF1Q16633 256 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 VAX1Q5SQQ9 334 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 C10orf55Q5SWW7 151 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 OR4A47Q6IF82 309 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 SSX9Q7RTT3 188 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 ZNF429Q86V71 674 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 FAM223AQ8IWN6 122 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 TTC9CQ8N5M4 171 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 FXYD6Q9H0Q3 95 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 HRASLSQ9HDD0 168 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 COMMD9Q9P000 198 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 SCOCQ9UIL1 159 aa7.57□□□□□ -1.2
HDAC6-207ENST00000430858 TRBV9A0A0B4J1U6 114 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 TEX22C9J3V5 150 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 RGS5O15539 181 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 NOL3O60936 208 aaKnown RBP7.56□□□□□ -1.2
HDAC6-207ENST00000430858 RLN1P04808 185 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 FGF2P09038 288 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 ZNF735P0CB33 412 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 HLA-GP17693 338 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 TBPP20226 339 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 F2RP25116 425 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 UCP3P55916 312 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 ERVK-16P61578 105 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 ZNF343Q6P1L6 599 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 ACSM6Q6P461 480 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 DGCR14Q96DF8 476 aaKnown RBP7.56□□□□□ -1.2
HDAC6-207ENST00000430858 ABHD1Q96SE0 405 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 SLC2A9Q9NRM0 540 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 CCDC59Q9P031 241 aaKnown RBP7.56□□□□□ -1.2
HDAC6-207ENST00000430858 KLK11Q9UBX7 282 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 MTFP1Q9UDX5 166 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
HDAC6-207ENST00000430858 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 ANKRD34BA5PLL1 514 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 DPPA5A6NC42 116 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 NPIPB5A8MRT5 1133 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 E7EUB6 86 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 UPK2O00526 184 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 CTDSP2O14595 271 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 SAP30O75446 220 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 S1PR2O95136 353 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 DHFRP00374 187 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 IFNA6P05013 189 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 IL6RP08887 468 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 ECI1P42126 302 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 MRPS10P82664 201 aaKnown RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 RHOGP84095 191 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 ZNF45Q02386 682 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 RNASE12Q5GAN4 147 aaKnown RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 RNASE10Q5GAN6 216 aaKnown RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 FAM209BQ5JX69 171 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 LAX1Q8IWV1 398 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 SLC38A6Q8IZM9 456 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 CADM3Q8N126 398 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 NECAP1Q8NC96 275 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 DMBX1Q8NFW5 382 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 OR52I2Q8NH67 350 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 DYNC2LI1Q8TCX1 351 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 FCAMRQ8WWV6 532 aa7.55□□□□□ -1.2
HDAC6-207ENST00000430858 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 SRSF8Q9BRL6 282 aaKnown RBP7.55□□□□□ -1.2
HDAC6-207ENST00000430858 RSRP1Q9BUV0 290 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms