RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ERVFC1-1P60608 527 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 DOLPP1Q86YN1 238 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 HSPB9Q9BQS6 159 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 SPRR3Q9UBC9 169 aa10.41□□□□□ -0.74
CDH3-202ENST00000429102 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 M0R143 59 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 FCN1O00602 326 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 MLNRO43193 412 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 CA1P00915 261 aaPredicted RBP10.4□□□□□ -0.74
CDH3-202ENST00000429102 SP1P08047 785 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.74
CDH3-202ENST00000429102 VWA1Q6PCB0 445 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 ST6GALNAC3Q8NDV1 305 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
CDH3-202ENST00000429102 SOX8P57073 446 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 FOXF2Q12947 444 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 BCL2L2Q92843 193 aaPredicted RBP10.4□□□□□ -0.74
CDH3-202ENST00000429102 SNHG12Q9BXW3 62 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 PXMP4Q9Y6I8 212 aa10.4□□□□□ -0.74
CDH3-202ENST00000429102 TRBV20OR9-2A0A075B6H5 130 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 IGHV1-2P23083 117 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 Q6ZS49 121 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 Q8NFD4 153 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 RND1Q92730 232 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 TMEM45BQ96B21 275 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 HSD17B10Q99714 261 aaKnown RBP10.4□□□□□ -0.75
CDH3-202ENST00000429102 TXN2Q99757 166 aa10.4□□□□□ -0.75
CDH3-202ENST00000429102 B4E171 279 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
CDH3-202ENST00000429102 OR7C2O60412 319 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 IGHEP01854 428 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 TSPAN7P41732 249 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 TMEM170AQ8WVE7 144 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 A0A1W2PNU3 283 aaPredicted RBP10.39□□□□□ -0.75
CDH3-202ENST00000429102 KLRC4-KLRK1H3BQV0 150 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 RPL31P62899 125 aaKnown RBP10.39□□□□□ -0.75
CDH3-202ENST00000429102 PRB3Q04118 309 aaPredicted RBP10.39□□□□□ -0.75
CDH3-202ENST00000429102 OR8I2Q8N0Y5 310 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 IGKV3D-15A0A087WSY6 115 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 LOC102724200A0A096LPH7 203 aaPredicted RBP10.39□□□□□ -0.75
CDH3-202ENST00000429102 SPINT2O43291 252 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 TCF21O43680 179 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 CGAP01215 116 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 CDKN1AP38936 164 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 ERVK-16P61578 105 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 RNF151Q2KHN1 245 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 PRR27Q6MZM9 219 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 HIPK2Q9H2X6 1198 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 NAGKQ9UJ70 344 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 TP53TG5Q9Y2B4 290 aa10.39□□□□□ -0.75
CDH3-202ENST00000429102 KIAA1549Q9HCM3 1950 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 C15orf62A8K5M9 175 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 CD46P15529 392 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 SP5Q6BEB4 398 aaPredicted RBP10.38□□□□□ -0.75
CDH3-202ENST00000429102 DUX4L9Q6RFH8 374 aaPredicted RBP10.38□□□□□ -0.75
CDH3-202ENST00000429102 LYG1Q8N1E2 194 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 LINC00470Q9BZP3 86 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 PKIBQ9C010 78 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 RNASE7Q9H1E1 156 aaKnown RBP10.38□□□□□ -0.75
CDH3-202ENST00000429102 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 ZNF83P51522 516 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 TRA2AQ13595 282 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDH3-202ENST00000429102 SPRNQ5BIV9 151 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
CDH3-202ENST00000429102 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 SERF1AO75920 110 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 PLAUP00749 431 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 CRISP2P16562 243 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 TIMP3P35625 211 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 RNPS1Q15287 305 aaKnown RBP10.38□□□□□ -0.75
CDH3-202ENST00000429102 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 FAM19A2Q8N3H0 131 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
CDH3-202ENST00000429102 CRYBB3P26998 211 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 REG1BP48304 166 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 PSG5Q15238 335 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 ZNF766Q5HY98 468 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 POLR3KQ9Y2Y1 108 aaPredicted RBP10.37□□□□□ -0.75
CDH3-202ENST00000429102 YTHDF2Q9Y5A9 579 aaKnown RBP10.37□□□□□ -0.75
CDH3-202ENST00000429102 MOB1BQ7L9L4 216 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 OR1L6Q8NGR2 347 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 SNRNP40Q96DI7 357 aaKnown RBP10.37□□□□□ -0.75
CDH3-202ENST00000429102 S1PR3Q99500 378 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 WNT10AQ9GZT5 417 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 ENY2Q9NPA8 101 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 RELNP78509 3460 aa10.37□□□□□ -0.75
CDH3-202ENST00000429102 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
CDH3-202ENST00000429102 NKX2-8O15522 239 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms