RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 VSTM2AQ8TAG5 236 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 SECTM1Q8WVN6 248 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 SLC25A38Q96DW6 304 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 OR2A7Q96R45 310 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 Q9H521 79 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 ZNF257Q9Y2Q1 563 aa12.95□□□□□ -0.34
TRIM39-209ENST00000428728 AIREO43918 545 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 IGHV3-23P01764 117 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 HLA-AP01891 365 aaKnown RBP12.94□□□□□ -0.34
TRIM39-209ENST00000428728 EDN2P20800 178 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 BRWD1-AS2P59051 145 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 CD81P60033 236 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 CD300EQ496F6 205 aaPredicted RBP12.94□□□□□ -0.34
TRIM39-209ENST00000428728 ADAMTSL5Q6ZMM2 481 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 PUSL1Q8N0Z8 303 aaKnown RBP12.94□□□□□ -0.34
TRIM39-209ENST00000428728 MFSD4AQ8N468 514 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 BEST4Q8NFU0 473 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 TMEM167AQ8TBQ9 72 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 EDA2RQ9HAV5 297 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 RETNQ9HD89 108 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 FBXL7Q9UJT9 491 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 S4R3C0 116 aa12.94□□□□□ -0.34
TRIM39-209ENST00000428728 DNAH7Q8WXX0 4024 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 TRAV18A0A075B6X5 111 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 A0A1B0GW64 132 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 E7EUB6 86 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 IL6RP08887 468 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-209ENST00000428728 MYOD1P15172 320 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 AREGP15514 252 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 IDNKQ5T6J7 187 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 ZNF773Q6PK81 442 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 ZNF66Q6ZN08 573 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 OR13F1Q8NGS4 319 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 OR2K2Q8NGT1 345 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 CCL28Q9NRJ3 127 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 ETV7Q9Y603 341 aa12.93□□□□□ -0.34
TRIM39-209ENST00000428728 NPIPB5A8MRT5 1133 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 REG1AP05451 166 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 ZNF735P0CB33 412 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 FCGR2CP31995 323 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 MAS1LP35410 378 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 MECP2P51608 486 aaKnown RBP12.92□□□□□ -0.34
TRIM39-209ENST00000428728 FXYD4P59646 89 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
TRIM39-209ENST00000428728 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 NEURL2Q9BR09 285 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 SELENOKQ9Y6D0 94 aa12.92□□□□□ -0.34
TRIM39-209ENST00000428728 TENM2Q9NT68 2774 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 C2orf70A6NJV1 201 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 GGCTO75223 188 aaKnown RBP12.91□□□□□ -0.34
TRIM39-209ENST00000428728 TPPPO94811 219 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 NDUFB8O95169 186 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 OR2C1O95371 312 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 HRASP01112 189 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 PPYP01298 95 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 IFNA6P05013 189 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 CD7P09564 240 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 KIR2DS2P43631 304 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 RPL8P62917 257 aaKnown RBP12.91□□□□□ -0.34
TRIM39-209ENST00000428728 NEDD8Q15843 81 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 GUCA2BQ16661 112 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 TIMM50Q3ZCQ8 353 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 FAM209BQ5JX69 171 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 CLEC19AQ6UXS0 136 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 FAM110AQ9BQ89 295 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 YTHDF1Q9BYJ9 559 aaKnown RBP12.91□□□□□ -0.34
TRIM39-209ENST00000428728 SLC5A7Q9GZV3 580 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 HRASLSQ9HDD0 168 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 SLC2A9Q9NRM0 540 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 CEPT1Q9Y6K0 416 aa12.91□□□□□ -0.34
TRIM39-209ENST00000428728 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 SULT1C2O00338 296 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 FOLR2P14207 255 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 HLA-GP17693 338 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 PSMB6P28072 239 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 ARL3P36405 182 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 SCAND1P57086 179 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 OR4A47Q6IF82 309 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 TMEM17Q86X19 198 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 HOGA1Q86XE5 327 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 LAX1Q8IWV1 398 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 SPAG16Q8N0X2 631 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 WDR89Q96FK6 387 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-209ENST00000428728 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 DMRT1Q9Y5R6 373 aa12.9□□□□□ -0.34
TRIM39-209ENST00000428728 LCE6AA0A183 80 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 DHFRP00374 187 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 DEFA4P12838 97 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 CATR1Q13166 79 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 DEFB125Q8N687 156 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 OR51H1Q8NH63 302 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 AUNIPQ9H7T9 357 aa12.89□□□□□ -0.35
TRIM39-209ENST00000428728 A0A0A6YYH2 397 aa12.88□□□□□ -0.35
TRIM39-209ENST00000428728 A6NJ64 397 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms