RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 DPRXA6NFQ7 191 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 MARCH11A6NNE9 402 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 AHRRA9YTQ3 701 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 MKRN2OSH3BPM6 223 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 RRHO14718 337 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 LMO1P25800 156 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 ICAM4Q14773 271 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 HEPN1Q6WQI6 88 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 Q8TCH9 128 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 CA5BP1Q8WTZ4 195 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 GCM1Q9NP62 436 aa6.93□□□□□ -1.3
CD44-208ENST00000428726 TET2Q6N021 2002 aaPredicted RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 SPINT2O43291 252 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 PPIHO43447 177 aaKnown RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 IGHV1-46P01743 117 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 IGHV2-5P01817 119 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 SMIM6P0DI80 62 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 CEACAM1P13688 526 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 FGF7P21781 194 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 USF2Q15853 346 aaPredicted RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 OR10W1Q8NGF6 305 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 R3HDM4Q96D70 268 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 GAR1Q9NY12 217 aaKnown RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 A0A1B0GW64 132 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 RNF212BA8MTL3 300 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 PRRG2O14669 202 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 ENSAO43768 121 aaKnown RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 DFFBO76075 338 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 SRP19P09132 144 aaKnown RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 CD40P25942 277 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 KHDC3LQ587J8 217 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 C1orf185Q5T7R7 199 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 ZNF787Q6DD87 383 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 ACSM6Q6P461 480 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 Q8NA96 180 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 DTD1Q8TEA8 209 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 ABHD5Q8WTS1 349 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 TMEM37Q8WXS4 190 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 ATP5SQ99766 215 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 ELOVL1Q9BW60 279 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 OR51M1Q9H341 326 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
CD44-208ENST00000428726 METTL1Q9UBP6 276 aaKnown RBP6.92□□□□□ -1.3
CD44-208ENST00000428726 A8MXE2 369 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 IGHV2-70P01814 119 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 S100A8P05109 93 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 KITLGP21583 273 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 TNFRSF9Q07011 255 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 SLC35E4Q6ICL7 350 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 C1orf174Q8IYL3 243 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 LHX4Q969G2 390 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 SGK494Q96LW2 274 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 S4R3C0 116 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 BTBD17A6NE02 478 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 OOEPA6NGQ2 149 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 C1QTNF9BB2RNN3 333 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 PPP1R2P9O14990 202 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 SPINK4O60575 86 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 DEFA6Q01524 100 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 RHEBQ15382 184 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 RNF212Q495C1 297 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 CT45A1Q5HYN5 189 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 Q6ZS92 163 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 RPP25LQ8N5L8 163 aaKnown RBP6.91□□□□□ -1.3
CD44-208ENST00000428726 CT45A3Q8NHU0 189 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 WASF3Q9UPY6 502 aa6.91□□□□□ -1.3
CD44-208ENST00000428726 A0A1W2PPQ1 181 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 H3BTX0 84 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 IGLV1-44P01699 117 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 P2RY6Q15077 328 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 FFAR4Q5NUL3 377 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 ZNF525Q8N782 197 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 ZNF645Q8N7E2 425 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 RCC1LQ96I51 464 aaKnown RBP6.9□□□□□ -1.3
CD44-208ENST00000428726 FAM210BQ96KR6 192 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 ATG101Q9BSB4 218 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 DERL1Q9BUN8 251 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 SEBOXQ9HB31 216 aaPredicted RBP6.9□□□□□ -1.3
CD44-208ENST00000428726 SLC39A9Q9NUM3 307 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 CALYQ9NYX4 217 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 ZNF462Q96JM2 2506 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 SAA2-SAA4A0A096LPE2 208 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 ZNF737O75373 536 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 CEACAM4O75871 244 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 TOX4O94842 621 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 SAA2P0DJI9 122 aaPredicted RBP6.9□□□□□ -1.3
CD44-208ENST00000428726 TAS2R30P59541 319 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 MZT1Q08AG7 82 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 MORN2Q502X0 79 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 MIC13Q5XKP0 118 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 DPPA3Q6W0C5 159 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.3
CD44-208ENST00000428726 TVP23CQ96ET8 276 aa6.9□□□□□ -1.3
CD44-208ENST00000428726 AGMATQ9BSE5 352 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms