RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 G6PC2Q9NQR9 355 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 FOXJ2Q9P0K8 574 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 RALGAPA2Q2PPJ7 1873 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 C7orf66A4D0T2 115 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 C1QCP02747 245 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 COX6A1P12074 109 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 IL11P20809 199 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 ATP5IP56385 69 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-208ENST00000428599 PPP1R27Q86WC6 154 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 FGFRL1Q8N441 504 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 DLL3Q9NYJ7 618 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 C4orf51C9J302 202 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 STAG3L3P0CL85 134 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 FSTP19883 344 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 PLP1P60201 277 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 VAX1Q5SQQ9 334 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 SLC25A47Q6Q0C1 308 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM106BQ9NUM4 274 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 DPM3Q9P2X0 92 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 SOX21Q9Y651 276 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-208ENST00000428599 MARCH11A6NNE9 402 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 MYOD1P15172 320 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 PAX1P15863 534 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 PKIAP61925 76 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 UNC119Q13432 240 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 ZNF345Q14585 488 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 UBE2V2Q15819 145 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 ACSF3Q4G176 576 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM170BQ5T4T1 132 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 NXT2Q9NPJ8 142 aaKnown RBP7.64□□□□□ -1.19
CTNND1-208ENST00000428599 TOMM7Q9P0U1 55 aa7.64□□□□□ -1.19
CTNND1-208ENST00000428599 SCN5AQ14524 2016 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 ZNF236Q9UL36 1845 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 J3QW42 95 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 CRIPAKQ8N1N5 446 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 ZNF703Q9H7S9 590 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-208ENST00000428599 JKAMPQ9P055 326 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 FBXL7Q9UJT9 491 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 TIAF1O95411 115 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 CEACAM1P13688 526 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 RPS11P62280 158 aaKnown RBP eCLIP7.63□□□□□ -1.19
CTNND1-208ENST00000428599 TIMM23BQ5SRD1 257 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 RGP1Q92546 391 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-208ENST00000428599 LEAP2Q969E1 77 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 MARVELD3Q96A59 401 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 SDF2L1Q9HCN8 221 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 LCTP09848 1927 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 NPIPB9F8W1W9 429 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 NPIPB7O75200 414 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 MEF2CQ06413 473 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-208ENST00000428599 PRSS22Q9GZN4 317 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 PATJQ8NI35 1801 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 TRBV7-9A0A0J9YWB2 115 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 LOC101059948A0A1B0GTJ6 334 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 RUNX1Q01196 453 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 C1QTNF12Q5T7M4 302 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 C10orf126Q8N4M7 172 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 TAF15Q92804 592 aaKnown RBP eCLIP7.63□□□□□ -1.193e-8■■■□□ 14.9
CTNND1-208ENST00000428599 HSPB9Q9BQS6 159 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 ZDBF2Q9HCK1 2354 aa7.63□□□□□ -1.19
CTNND1-208ENST00000428599 IGHV3-23P01764 117 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 HKR1P10072 659 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 GZMMP51124 257 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 FOXB2Q5VYV0 432 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 OR10S1Q8NGN2 331 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 OR13A1Q8NGR1 328 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 SPSB4Q96A44 273 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGHV3-35A0A0C4DH35 117 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 PRSS23O95084 383 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 HLA-DRB1P01911 266 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 FOLR2P14207 255 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 RIPPLY2Q5TAB7 128 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 PEAR1Q5VY43 1037 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-208ENST00000428599 KIR3DL3Q8N743 410 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 LINC00862A6NCI5 91 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGKV1D-33P01593 117 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGKV1-33P01594 117 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 ZNF883P0CG24 379 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 TMEM252Q8N6L7 170 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 C8orf46Q8TAG6 207 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGHV3OR16-13A0A075B7E8 117 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGHV3-74A0A0B4J1X5 117 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGHV3-66A0A0C4DH42 116 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 LEPP41159 167 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 MEF2BQ02080 365 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-208ENST00000428599 PRSS53Q2L4Q9 553 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 Q6ZT83 130 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 CYB561D1Q8N8Q1 229 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 SBF1O95248 1867 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 OR11H12B2RN74 326 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 M0R381 172 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 ZNHIT1O43257 154 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGF2P01344 180 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 IGLV3-19P01714 112 aa7.62□□□□□ -1.19
CTNND1-208ENST00000428599 HOXA5P20719 270 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms