RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 KLF4O43474 513 aa12.37□□□□□ -0.43
PTPRU-204ENST00000428026 ANOS1P23352 680 aa12.37□□□□□ -0.43
PTPRU-204ENST00000428026 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
PTPRU-204ENST00000428026 SMIM8Q96KF7 97 aa12.37□□□□□ -0.43
PTPRU-204ENST00000428026 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
PTPRU-204ENST00000428026 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
PTPRU-204ENST00000428026 LGALS3P17931 250 aaKnown RBP12.36□□□□□ -0.43
PTPRU-204ENST00000428026 HOXA5P20719 270 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 CRYBA2P53672 197 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 IGHV1-45A0A0A0MS14 117 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A26D6RGX4 464 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 C1QL2Q7Z5L3 287 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 KIF13BQ9NQT8 1826 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 MIA3Q5JRA6 1907 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 HSPE1P61604 102 aaKnown RBP12.36□□□□□ -0.43
PTPRU-204ENST00000428026 KLRB1Q12918 225 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 ITLN1Q8WWA0 313 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 MS4A5Q9H3V2 200 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 TMEM160Q9NX00 188 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 TCF19Q9Y242 345 aa12.36□□□□□ -0.43
PTPRU-204ENST00000428026 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 TRBV9A0A0B4J1U6 114 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 THY1P04216 161 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 ERGP11308 486 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 CEACAM1P13688 526 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 SMAGPQ0VAQ4 97 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 ASPHD2Q6ICH7 369 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 WDYHV1Q96HA8 205 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 OPN3Q9H1Y3 402 aaPredicted RBP12.35□□□□□ -0.43
PTPRU-204ENST00000428026 CEP250Q9BV73 2442 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 TIAF1O95411 115 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 GCSAMLQ5JQS6 135 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 FAM53AQ6NSI3 398 aaPredicted RBP12.35□□□□□ -0.43
PTPRU-204ENST00000428026 NIT1Q86X76 327 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 DRAM1Q8N682 238 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 ZNF441Q8N8Z8 693 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 IL4P05112 153 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 PSME4Q14997 1843 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 CX3CL1P78423 397 aa12.35□□□□□ -0.43
PTPRU-204ENST00000428026 TMEM250H0YL14 139 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 GPR6P46095 362 aaPredicted RBP12.34□□□□□ -0.43
PTPRU-204ENST00000428026 P2RY6Q15077 328 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 PEAR1Q5VY43 1037 aaPredicted RBP12.34□□□□□ -0.43
PTPRU-204ENST00000428026 OR10J6PQ8NGY7 276 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 CALYQ9NYX4 217 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 ODAMA1E959 279 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A10PA6NDY2 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A18PA6NE21 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A16PA6NEW6 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A8PA6NJQ4 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A7PA6NKC0 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A22PA8MWA6 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A23PA8MXZ1 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 CSRP3P50461 194 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 TNFSF10P50591 281 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 DLX6P56179 175 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 HBBP68871 147 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 TFF3Q07654 80 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 MUC21Q5SSG8 566 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 UBE2L6O14933 153 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 MOSP00540 346 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 OR51G1Q8NGK1 321 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 SCARF2Q96GP6 870 aaPredicted RBP12.34□□□□□ -0.43
PTPRU-204ENST00000428026 PHLDA3Q9Y5J5 127 aa12.34□□□□□ -0.43
PTPRU-204ENST00000428026 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 NPIPB6E9PJ23 425 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 TGFAP01135 160 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 ATP5G3P48201 142 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 GCSAMQ8N6F7 178 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 NPIPB3Q92617 1050 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 ALKBH7Q9BT30 221 aaPredicted RBP12.33□□□□□ -0.44
PTPRU-204ENST00000428026 CGAP01215 116 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 LCN2P80188 198 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 EGR4Q05215 589 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 A0A0G2JMZ2 1700 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 TSPAN13O95857 204 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 ZNF883P0CG24 379 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 EBLN2Q6P2I7 272 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 TCF24Q7RTU0 167 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 ZNF414Q96IQ9 312 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
PTPRU-204ENST00000428026 IGHV3-35A0A0C4DH35 117 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 BTCP35070 178 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 FHL5Q5TD97 284 aa12.33□□□□□ -0.44
PTPRU-204ENST00000428026 NPCDR1Q9BY65 106 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms