RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 COA4Q9NYJ1 87 aa9.69□□□□□ -0.86
RFC4-206ENST00000427785 MAP1AP78559 2803 aaPredicted RBP9.68□□□□□ -0.86
RFC4-206ENST00000427785 ZANQ9Y493 2812 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 MDFIC2A0A1B0GVS7 189 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 WRBO00258 174 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 KBTBD11O94819 623 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 SLC25A4P12235 298 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 CD1BP29016 333 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 KRTAP1-1Q07627 177 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 HNF4GQ14541 408 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 MMDQ15546 238 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 VMA21Q3ZAQ7 101 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 FAM120AOSQ5T036 256 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 OR4A16Q8NH70 328 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 RNF126Q9BV68 326 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 PLSCR3Q9NRY6 295 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.68□□□□□ -0.86
RFC4-206ENST00000427785 BET1LQ9NYM9 111 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 ACANP16112 2415 aa9.68□□□□□ -0.86
RFC4-206ENST00000427785 MSGN1A6NI15 193 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 UPK2O00526 184 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 SNAPC5O75971 98 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 OR2F2O95006 317 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 MOSP00540 346 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 FSHBP01225 129 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 LYL1P12980 280 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 CXCL2P19875 107 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 ARHGDIBP52566 201 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 UBE2KP61086 200 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 PSG5Q15238 335 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 ZDHHC16Q969W1 377 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 EAF1Q96JC9 268 aaPredicted RBP9.67□□□□□ -0.86
RFC4-206ENST00000427785 TSNAXQ99598 290 aaKnown RBP9.67□□□□□ -0.86
RFC4-206ENST00000427785 FBXL15Q9H469 300 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 RBKSQ9H477 322 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 C11orf1Q9H5F2 150 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
RFC4-206ENST00000427785 HSPB7Q9UBY9 170 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 TNFSF18Q9UNG2 199 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 FOXA2Q9Y261 457 aaPredicted RBP9.67□□□□□ -0.86
RFC4-206ENST00000427785 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 BAHCC1Q9P281 2608 aa9.67□□□□□ -0.86
RFC4-206ENST00000427785 CSMD1Q96PZ7 3565 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 CEBPZOSA8MTT3 80 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 FAM90A26D6RGX4 464 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 H3BP45 60 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 L7N2F9 121 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 IFNA17P01571 189 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 TMEM11P17152 192 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 LGALS7P47929 136 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 AP2S1P53680 142 aaPredicted RBP9.66□□□□□ -0.86
RFC4-206ENST00000427785 VAMP2P63027 116 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 ID3Q02535 119 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 C10orf55Q5SWW7 151 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 IL17RELQ6ZVW7 336 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 ZNF546Q86UE3 836 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 OR2T10Q8NGZ9 312 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 TMEM167AQ8TBQ9 72 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 C22orf15Q8WYQ4 148 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 CLCC1Q96S66 551 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 AIFM2Q9BRQ8 373 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 ZNF430Q9H8G1 570 aaPredicted RBP9.66□□□□□ -0.86
RFC4-206ENST00000427785 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 NUP50Q9UKX7 468 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 PRNDQ9UKY0 176 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 HSPB11Q9Y547 144 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 OR51B2Q9Y5P1 312 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
RFC4-206ENST00000427785 SONP18583 2426 aaKnown RBP9.65□□□□□ -0.86
RFC4-206ENST00000427785 HMSDA8MTL9 139 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 E5RGE8 158 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 RRHO14718 337 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 NBR2O15453 112 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 SYNGR2O43760 224 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 SPDEFO95238 335 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 TMEM50AO95807 157 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 OPN1MWP04001 364 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 RLN2P04090 185 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 IL6RP08887 468 aaPredicted RBP9.65□□□□□ -0.86
RFC4-206ENST00000427785 FBP1P09467 338 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 OPN1MW2P0DN77 364 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 OPN1MW3P0DN78 364 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 BRS3P32247 399 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 HOXA1P49639 335 aaPredicted RBP9.65□□□□□ -0.86
RFC4-206ENST00000427785 F2RL1P55085 397 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 RPL8P62917 257 aaKnown RBP9.65□□□□□ -0.86
RFC4-206ENST00000427785 PJVKQ0ZLH3 352 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 PLGLAQ15195 96 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 BCL6BQ8N143 479 aaPredicted RBP9.65□□□□□ -0.86
RFC4-206ENST00000427785 Q8N6K4 173 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 OR4A5Q8NH83 315 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 VSTM2AQ8TAG5 236 aa9.65□□□□□ -0.86
RFC4-206ENST00000427785 HINT2Q9BX68 163 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms