RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 IL34Q6ZMJ4 242 aa21.59■■□□□ 1.05
SH3GL3-202ENST00000427482 HARBI1Q96MB7 349 aa21.59■■□□□ 1.05
SH3GL3-202ENST00000427482 PARD6GQ9BYG4 376 aaPredicted RBP21.59■■□□□ 1.05
SH3GL3-202ENST00000427482 ARHGAP32A7KAX9 2087 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 C15orf62A8K5M9 175 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 TRIM77I1YAP6 450 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 F2RL1P55085 397 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 PUSL1Q8N0Z8 303 aaKnown RBP21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 Q8N7P7 452 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 LYPD6BQ8NI32 183 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 IGFBPL1Q8WX77 278 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 LHX4Q969G2 390 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 LINC00052Q96N35 136 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 PRNDQ9UKY0 176 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 WASHC3Q9Y3C0 194 aa21.58■■□□□ 1.05
SH3GL3-202ENST00000427482 UMAD1C9J7I0 102 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 SAA1P0DJI8 122 aaPredicted RBP21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 CAMLGP49069 296 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 HSPE1P61604 102 aaKnown RBP21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 UQCC3Q6UW78 93 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 SCGB1C1Q8TD33 95 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 FLYWCH2Q96CP2 140 aaKnown RBP21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 SPOCK3Q9BQ16 436 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 PRH1P02810 166 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 COX7A1P24310 79 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 PRB3Q04118 309 aaPredicted RBP21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 PJVKQ0ZLH3 352 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 ATP6V1FQ16864 119 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 LRRC75BQ2VPJ9 315 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 OR10P1Q8NGE3 313 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 OR4C13Q8NGP0 309 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 PINX1Q96BK5 328 aaKnown RBP21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 HIPK2Q9H2X6 1198 aa21.57■■□□□ 1.04
SH3GL3-202ENST00000427482 BUB1B-PAK6H3BSN5 160 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 M0R1W7 72 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 SCAF4O95104 1147 aaKnown RBP21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 OR8U8P0C7N1 319 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 FHITP49789 147 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 RAB13P51153 203 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 THNSL2Q86YJ6 484 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 HEYLQ9NQ87 328 aaPredicted RBP21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 OR51B2Q9Y5P1 312 aa21.56■■□□□ 1.04
SH3GL3-202ENST00000427482 KRBOX1C9JBD0 128 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 MC5RP33032 325 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 HOXA1P49639 335 aaPredicted RBP21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 RPP30P78346 268 aaKnown RBP21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 OR4P4Q8NGL7 312 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 WDR61Q9GZS3 305 aaKnown RBP21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 ZNF257Q9Y2Q1 563 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 ZFYVE26Q68DK2 2539 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 KBTBD11O94819 623 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 IGHV2-5P01817 119 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 TMEM147Q9BVK8 224 aa21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 AMMECR1Q9Y4X0 333 aaPredicted RBP21.55■■□□□ 1.04
SH3GL3-202ENST00000427482 UBE2L5PA0A1B0GUS4 154 aa21.54■■□□□ 1.04
SH3GL3-202ENST00000427482 RPS16P62249 146 aaKnown RBP21.54■■□□□ 1.04
SH3GL3-202ENST00000427482 ARF6P62330 175 aa21.54■■□□□ 1.04
SH3GL3-202ENST00000427482 ZNF616Q08AN1 781 aa21.54■■□□□ 1.04
SH3GL3-202ENST00000427482 PNKDQ8N490 385 aa21.54■■□□□ 1.04
SH3GL3-202ENST00000427482 MYOD1P15172 320 aa21.53■■□□□ 1.04
SH3GL3-202ENST00000427482 FAM213BQ8TBF2 198 aa21.53■■□□□ 1.04
SH3GL3-202ENST00000427482 PSMG3Q9BT73 122 aaPredicted RBP21.53■■□□□ 1.04
SH3GL3-202ENST00000427482 RSG1Q9BU20 258 aa21.53■■□□□ 1.04
SH3GL3-202ENST00000427482 TNCP24821 2201 aa21.53■■□□□ 1.04
SH3GL3-202ENST00000427482 IFNA10P01566 189 aa21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 BPIFCQ8NFQ6 507 aa21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 MS4A7Q9GZW8 240 aaPredicted RBP21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 FKBP11Q9NYL4 201 aa21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 USP9XQ93008 2570 aaPredicted RBP21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 IGHV4-39P01824 125 aa21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 VWC2Q2TAL6 325 aa21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 TAF15Q92804 592 aaKnown RBP eCLIP21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 UQCC1Q9NVA1 299 aa21.52■■□□□ 1.04
SH3GL3-202ENST00000427482 FLNCQ14315 2725 aa21.52■■□□□ 1.03
SH3GL3-202ENST00000427482 IGLV2-23P01705 113 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 PRCDQ00LT1 54 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 AKR1C8PQ5T2L2 129 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 OR4A5Q8NH83 315 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 ENY2Q9NPA8 101 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 SIRT7Q9NRC8 400 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 FBXO7Q9Y3I1 522 aa21.51■■□□□ 1.03
SH3GL3-202ENST00000427482 LY6LH3BQJ8 138 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 ZFP36P26651 326 aaKnown RBP21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 KIR3DL3Q8N743 410 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 OR11H6Q8NGC7 330 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 VSTM2AQ8TAG5 236 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 TMEM167AQ8TBQ9 72 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 CCL19Q99731 98 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 BPESC1Q9GZL8 116 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 IGHV1-3A0A0C4DH29 117 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 TEX50A0A1B0GTY4 177 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 RRHO14718 337 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 TSPAN15O95858 294 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 USF1P22415 310 aaPredicted RBP21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 PRTN3P24158 256 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 C1orf122Q6ZSJ8 110 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 CCDC28AQ8IWP9 274 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 OR5B3Q8NH48 314 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 TMEM170AQ8WVE7 144 aa21.5■■□□□ 1.03
SH3GL3-202ENST00000427482 SRSF3P84103 164 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms