RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 SLC25A42Q86VD7 318 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 PUSL1Q8N0Z8 303 aaKnown RBP13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 ADAD2Q8NCV1 583 aaKnown RBP13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 OR6F1Q8NGZ6 308 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 OR51H1Q8NH63 302 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 CD300LFQ8TDQ1 290 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 GPX8Q8TED1 209 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 MOB3AQ96BX8 217 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 USMG5Q96IX5 58 aa13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 RANGRFQ9HD47 186 aaPredicted RBP13.49□□□□□ -0.25
SLC6A1-202ENST00000425938 HLA-DMAP28067 261 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 GNRHRP30968 328 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 HRH1P35367 487 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 ALDH3B2P48448 385 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 SSX9Q7RTT3 188 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
SLC6A1-202ENST00000425938 ANKRD34BA5PLL1 514 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 DPPA5A6NC42 116 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 SAP30O75446 220 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 HPRT1P00492 218 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 RCVRNP35243 200 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 RPL27AP46776 148 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 TAS2R31P59538 309 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 TSPAN5P62079 268 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 LYSMD2Q8IV50 215 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 CMTM1Q8IZ96 169 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 FYTTD1Q96QD9 318 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 HRASLSQ9HDD0 168 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 BET1LQ9NYM9 111 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 ADAM30Q9UKF2 790 aa13.47□□□□□ -0.25
SLC6A1-202ENST00000425938 FAM223BA6NKX1 122 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 NQO2P16083 231 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 DEFA5Q01523 94 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 OR4A47Q6IF82 309 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 FAM223AQ8IWN6 122 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 PLEKHA2Q9HB19 425 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 PEF1Q9UBV8 284 aaKnown RBP13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 ZNF256Q9Y2P7 627 aaPredicted RBP13.46□□□□□ -0.25
SLC6A1-202ENST00000425938 LY86O95711 162 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 HLA-GP17693 338 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 S100GP29377 79 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 RHOGP84095 191 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 LPCAT3Q6P1A2 487 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 ACSM6Q6P461 480 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 OR4C12Q96R67 309 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 PRR25Q96S07 402 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 COMMD9Q9P000 198 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 ZNF257Q9Y2Q1 563 aa13.45□□□□□ -0.26
SLC6A1-202ENST00000425938 COL7A1Q02388 2944 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 DNAH9Q9NYC9 4486 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 HMX3A6NHT5 357 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 GPR31O00270 319 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 TPPPO94811 219 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 PRH1P02810 166 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 RLN1P04808 185 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 ERVK-16P61578 105 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 ATP5G2Q06055 141 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 POU2AF1Q16633 256 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 CLVS1Q8IUQ0 354 aaPredicted RBP13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 NECAP1Q8NC96 275 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 RAB2BQ8WUD1 216 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 C15orf40Q8WUR7 153 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 FXYD6Q9H0Q3 95 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 AKIP1Q9NQ31 210 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 SLC2A9Q9NRM0 540 aa13.44□□□□□ -0.26
SLC6A1-202ENST00000425938 TRBV9A0A0B4J1U6 114 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 NPIPB5A8MRT5 1133 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 TEX22C9J3V5 150 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 S1PR2O95136 353 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 DHFRP00374 187 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 IL6RP08887 468 aaPredicted RBP13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 ZNF735P0CB33 412 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 F2RP25116 425 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 CD69Q07108 199 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 RNASE12Q5GAN4 147 aaKnown RBP13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 TMEM140Q9NV12 185 aa13.43□□□□□ -0.26
SLC6A1-202ENST00000425938 UPK2O00526 184 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 RGS5O15539 181 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 NOL3O60936 208 aaKnown RBP13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 IFNA6P05013 189 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 ZNF45Q02386 682 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 EXOSC2Q13868 293 aaKnown RBP13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 SPCS2Q15005 226 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 TATDN3Q17R31 274 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 FAM209BQ5JX69 171 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 VAX1Q5SQQ9 334 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 B9D2Q9BPU9 175 aa13.42□□□□□ -0.26
SLC6A1-202ENST00000425938 BCL7BQ9BQE9 202 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms