RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 THNSL2Q86YJ6 484 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 LYPD6BQ8NI32 183 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 LHX4Q969G2 390 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 AIFM2Q9BRQ8 373 aa21.51■■□□□ 1.03
LDB1-202ENST00000425280 ZFYVE26Q68DK2 2539 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 SAA1P0DJI8 122 aaPredicted RBP21.5■■□□□ 1.03
LDB1-202ENST00000425280 F2RL1P55085 397 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 PJVKQ0ZLH3 352 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 PDPNQ86YL7 162 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 Q8N7P7 452 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 SCGB1C1Q8TD33 95 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 FLYWCH2Q96CP2 140 aaKnown RBP21.5■■□□□ 1.03
LDB1-202ENST00000425280 HARBI1Q96MB7 349 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 CLCC1Q96S66 551 aa21.5■■□□□ 1.03
LDB1-202ENST00000425280 TRIM77I1YAP6 450 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 COX7A1P24310 79 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 HSPE1P61604 102 aaKnown RBP21.49■■□□□ 1.03
LDB1-202ENST00000425280 LRRC75BQ2VPJ9 315 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 BEND2Q8NDZ0 799 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 HEYLQ9NQ87 328 aaPredicted RBP21.49■■□□□ 1.03
LDB1-202ENST00000425280 BET1LQ9NYM9 111 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 PRNDQ9UKY0 176 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 DOPEY1Q5JWR5 2465 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 UMAD1C9J7I0 102 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 KRBOX1C9JBD0 128 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 UQCC3Q6UW78 93 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 PUSL1Q8N0Z8 303 aaKnown RBP21.49■■□□□ 1.03
LDB1-202ENST00000425280 OR10P1Q8NGE3 313 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 PARD6GQ9BYG4 376 aaPredicted RBP21.49■■□□□ 1.03
LDB1-202ENST00000425280 HIPK2Q9H2X6 1198 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 WASHC3Q9Y3C0 194 aa21.49■■□□□ 1.03
LDB1-202ENST00000425280 MYOD1P15172 320 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 TLE4Q04727 773 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 ZNF616Q08AN1 781 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 OR51B2Q9Y5P1 312 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 BUB1B-PAK6H3BSN5 160 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 HOXA1P49639 335 aaPredicted RBP21.48■■□□□ 1.03
LDB1-202ENST00000425280 ARF6P62330 175 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 ATP6V1FQ16864 119 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 BPIFCQ8NFQ6 507 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 OR4C13Q8NGP0 309 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 FAM213BQ8TBF2 198 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 IGFBPL1Q8WX77 278 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 PINX1Q96BK5 328 aaKnown RBP21.48■■□□□ 1.03
LDB1-202ENST00000425280 RSG1Q9BU20 258 aa21.48■■□□□ 1.03
LDB1-202ENST00000425280 WDR61Q9GZS3 305 aaKnown RBP21.48■■□□□ 1.03
LDB1-202ENST00000425280 KLF2Q9Y5W3 355 aaPredicted RBP21.48■■□□□ 1.03
LDB1-202ENST00000425280 PNKDQ8N490 385 aa21.47■■□□□ 1.03
LDB1-202ENST00000425280 ARHGAP32A7KAX9 2087 aa21.47■■□□□ 1.03
LDB1-202ENST00000425280 UBE2L5PA0A1B0GUS4 154 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 OR8U8P0C7N1 319 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 RPP30P78346 268 aaKnown RBP21.46■■□□□ 1.03
LDB1-202ENST00000425280 OR4P4Q8NGL7 312 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 TMEM147Q9BVK8 224 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 FBXO7Q9Y3I1 522 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 M0R1W7 72 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 KBTBD11O94819 623 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 IFNA10P01566 189 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 MC5RP33032 325 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 RAB13P51153 203 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 SRSF3P84103 164 aaKnown RBP21.46■■□□□ 1.03
LDB1-202ENST00000425280 SPOCK3Q9BQ16 436 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 ZNF257Q9Y2Q1 563 aa21.46■■□□□ 1.03
LDB1-202ENST00000425280 FLNCQ14315 2725 aa21.45■■□□□ 1.02
LDB1-202ENST00000425280 USP9XQ93008 2570 aaPredicted RBP21.45■■□□□ 1.02
LDB1-202ENST00000425280 IGHV2-5P01817 119 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 AKR1C1Q04828 323 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 TUSC1Q2TAM9 212 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 TAF15Q92804 592 aaKnown RBP eCLIP21.44■■□□□ 1.02
LDB1-202ENST00000425280 MS4A7Q9GZW8 240 aaPredicted RBP21.44■■□□□ 1.02
LDB1-202ENST00000425280 UQCC1Q9NVA1 299 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 RRHO14718 337 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 AGPAT2O15120 278 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 TSPAN15O95858 294 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 ZFP36P26651 326 aaKnown RBP21.44■■□□□ 1.02
LDB1-202ENST00000425280 AKR1C8PQ5T2L2 129 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 TMEM170AQ8WVE7 144 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 PSMG3Q9BT73 122 aaPredicted RBP21.44■■□□□ 1.02
LDB1-202ENST00000425280 SIRT7Q9NRC8 400 aa21.44■■□□□ 1.02
LDB1-202ENST00000425280 AMMECR1Q9Y4X0 333 aaPredicted RBP21.44■■□□□ 1.02
LDB1-202ENST00000425280 SCAF4O95104 1147 aaKnown RBP21.43■■□□□ 1.02
LDB1-202ENST00000425280 IGLV2-23P01705 113 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 IGHV4-39P01824 125 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 VWC2Q2TAL6 325 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 CCDC28AQ8IWP9 274 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 SPTAN1Q13813 2472 aaKnown RBP21.43■■□□□ 1.02
LDB1-202ENST00000425280 IGHV3-72A0A0B4J1Y9 119 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 TEX50A0A1B0GTY4 177 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 HINT2Q9BX68 163 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 ENY2Q9NPA8 101 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 FKBP11Q9NYL4 201 aa21.43■■□□□ 1.02
LDB1-202ENST00000425280 LY6LH3BQJ8 138 aa21.42■■□□□ 1.02
LDB1-202ENST00000425280 PRCDQ00LT1 54 aa21.42■■□□□ 1.02
LDB1-202ENST00000425280 NARS2Q96I59 477 aaKnown RBP21.42■■□□□ 1.02
LDB1-202ENST00000425280 RITA1Q96K30 269 aa21.42■■□□□ 1.02
LDB1-202ENST00000425280 BPESC1Q9GZL8 116 aa21.42■■□□□ 1.02
LDB1-202ENST00000425280 IGHV1-3A0A0C4DH29 117 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 OPN1MWP04001 364 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 OPN1MW2P0DN77 364 aa21.41■■□□□ 1.02
LDB1-202ENST00000425280 OPN1MW3P0DN78 364 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms