RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 WRBO00258 174 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 UPK2O00526 184 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 PITX3O75364 302 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 ACTL6BO94805 426 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 KBTBD11O94819 623 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 VENTXO95231 258 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 SPDEFO95238 335 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 IGKV1D-33P01593 117 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 IGKV1-33P01594 117 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 C1QBP02746 253 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 HNRNPCP07910 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
MDC1-205ENST00000425072 SNRNP70P08621 437 aaKnown RBP8.3□□□□□ -1.08
MDC1-205ENST00000425072 IL6RP08887 468 aaPredicted RBP8.3□□□□□ -1.08
MDC1-205ENST00000425072 P0C879 139 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 MAS1LP35410 378 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 NUP62P37198 522 aaPredicted RBP8.3□□□□□ -1.08
MDC1-205ENST00000425072 PSG5Q15238 335 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 ZFP69Q49AA0 526 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 OR4A47Q6IF82 309 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 C9orf139Q6ZV77 190 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 SSX9Q7RTT3 188 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 ZNF429Q86V71 674 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 PUSL1Q8N0Z8 303 aaKnown RBP8.3□□□□□ -1.08
MDC1-205ENST00000425072 DYNAPQ8N1N2 210 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 NPBQ8NG41 125 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 PPP1R1CQ8WVI7 109 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 SSX3Q99909 188 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 TMEM140Q9NV12 185 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 TMEM160Q9NX00 188 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 CACNG5Q9UF02 275 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 PITPNC1Q9UKF7 332 aa8.3□□□□□ -1.08
MDC1-205ENST00000425072 A0A0U1RQK1 487 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 MPC2O95563 127 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 FSHBP01225 129 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 IFNA17P01571 189 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 SLC25A4P12235 298 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 CD99P14209 185 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 TMEM11P17152 192 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
MDC1-205ENST00000425072 SPCS3P61009 180 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 HSPE1P61604 102 aaKnown RBP8.29□□□□□ -1.08
MDC1-205ENST00000425072 RELBQ01201 579 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 HNF4GQ14541 408 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 LRRC75BQ2VPJ9 315 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 RUSC1-AS1Q66K80 236 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 TMEM65Q6PI78 240 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 Q6ZRM9 215 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 MMD2Q8IY49 270 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 OR4D5Q8NGN0 318 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 TMEM167AQ8TBQ9 72 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 C17orf50Q8WW18 174 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 RAB40CQ96S21 281 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 CLCC1Q96S66 551 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 COMMD5Q9GZQ3 224 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 ZNF257Q9Y2Q1 563 aa8.29□□□□□ -1.08
MDC1-205ENST00000425072 NCBP2LA6PVI3 153 aaKnown RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 HMSDA8MTL9 139 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 E5RGE8 158 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 L7N2F9 121 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 RRHO14718 337 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 NBR2O15453 112 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 SYNGR2O43760 224 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 SLC25A17O43808 307 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 GPR137BO60478 399 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 IGLV2-23P01705 113 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 MBPP02686 304 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 ATP5IP56385 69 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 RPL8P62917 257 aaKnown RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 VAMP2P63027 116 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 RPP30P78346 268 aaKnown RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 RAB32Q13637 225 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 PLGLAQ15195 96 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 AARDQ4LEZ3 155 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 CXorf66Q5JRM2 361 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 FAM120AOSQ5T036 256 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 C11orf87Q6NUJ2 197 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 PRSS54Q6PEW0 395 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 ZNF546Q86UE3 836 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 PPP1R27Q86WC6 154 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 MRPL41Q8IXM3 137 aaKnown RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 VKORC1L1Q8N0U8 176 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 INO80EQ8NBZ0 244 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 OR5B3Q8NH48 314 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 OR5R1Q8NH85 324 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 WDR89Q96FK6 387 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 RITA1Q96K30 269 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 CIB3Q96Q77 187 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 METTL1Q9UBP6 276 aaKnown RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 HSPB7Q9UBY9 170 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 FOXA2Q9Y261 457 aaPredicted RBP8.28□□□□□ -1.08
MDC1-205ENST00000425072 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 SIGLEC9Q9Y336 463 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 OR51B2Q9Y5P1 312 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
MDC1-205ENST00000425072 A0A0G2JRQ6 117 aa8.27□□□□□ -1.09
MDC1-205ENST00000425072 BTBD17A6NE02 478 aa8.27□□□□□ -1.09
MDC1-205ENST00000425072 M0QZK8 103 aa8.27□□□□□ -1.09
MDC1-205ENST00000425072 CHST1O43916 411 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms