RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 GZMHP20718 246 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 CHRNB4P30926 498 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 RAB5CP51148 216 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 ZNF709Q8N972 641 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 C12orf57Q99622 126 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 KIAA1456Q9P272 454 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 C1orf196B1AJZ1 125 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 E7EUB6 86 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 RAB5AP20339 215 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 TMEM170AQ8WVE7 144 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 RITA1Q96K30 269 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 LURAP1Q96LR2 239 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 ELOVL1Q9BW60 279 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 NPCDR1Q9BY65 106 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 MS4A5Q9H3V2 200 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 PRELID3BQ9Y3B1 194 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 DUXBA0A1W2PPF3 345 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 NPIPB11E5RHQ5 1161 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 FOXH1O75593 365 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 ATP5G3P48201 142 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 NDUFA6P56556 154 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 ERVK-16P61578 105 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 EIF2S3LQ2VIR3 472 aaKnown RBP9.8□□□□□ -0.84
PTPRN-204ENST00000423636 IGFL3Q6UXB1 125 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 DOK5Q9P104 306 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 SLC25A10Q9UBX3 287 aaPredicted RBP9.8□□□□□ -0.84
PTPRN-204ENST00000423636 CSPG4Q6UVK1 2322 aa9.8□□□□□ -0.84
PTPRN-204ENST00000423636 OR8U8P0C7N1 319 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 EIF4EBP1Q13541 118 aaPredicted RBP9.79□□□□□ -0.84
PTPRN-204ENST00000423636 LY6DQ14210 128 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 PRSS8Q16651 343 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 OR4A47Q6IF82 309 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 NANPQ8TBE9 248 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 ZANQ9Y493 2812 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 NUDT19A8MXV4 375 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 J3QW42 95 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 BCL2P10415 239 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 CEACAM8P31997 349 aaPredicted RBP9.79□□□□□ -0.84
PTPRN-204ENST00000423636 CHRNA7P36544 502 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 FAM216AQ8WUB2 273 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 IFNL4K9M1U5 179 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 TRGC2P03986 189 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 TIMP3P35625 211 aa9.79□□□□□ -0.84
PTPRN-204ENST00000423636 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
PTPRN-204ENST00000423636 ZCCHC14Q8WYQ9 949 aaKnown RBP9.79□□□□□ -0.84
PTPRN-204ENST00000423636 HSD17B10Q99714 261 aaKnown RBP9.79□□□□□ -0.84
PTPRN-204ENST00000423636 KBTBD11-OT1A0A1B0GTJ5 212 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 LOC102723971A0A1B0GUV8 181 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 WNT2P09544 360 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
PTPRN-204ENST00000423636 CD1BP29016 333 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 PPP1R35Q8TAP8 253 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 SFXN3Q9BWM7 321 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 MRPL20Q9BYC9 149 aaKnown RBP9.78□□□□□ -0.84
PTPRN-204ENST00000423636 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 PMS2P5A8MQ11 134 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 LHBP01229 141 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 COX7A1P24310 79 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 TDGF1P3P51864 188 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 CD81P60033 236 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 RNF212Q495C1 297 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 TMEM41BQ5BJD5 291 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 KIR3DL3Q8N743 410 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
PTPRN-204ENST00000423636 E7EQL1 145 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 ADH4P08319 380 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 TNFSF4P23510 183 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 RAB5BP61020 215 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 CDPF1Q6NVV7 123 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 ABHD5Q8WTS1 349 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 ZNF251Q9BRH9 671 aa9.77□□□□□ -0.84
PTPRN-204ENST00000423636 C17orf100A8MU93 164 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 CA2P00918 260 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 OR10J4P0C629 311 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 RELBQ01201 579 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 PDLIM3Q53GG5 364 aaPredicted RBP9.77□□□□□ -0.85
PTPRN-204ENST00000423636 CA5BP1Q8WTZ4 195 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 SEPSECSQ9HD40 501 aaKnown RBP9.77□□□□□ -0.85
PTPRN-204ENST00000423636 CTSZQ9UBR2 303 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 USP9XQ93008 2570 aaPredicted RBP9.77□□□□□ -0.85
PTPRN-204ENST00000423636 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 IGLV3-9A0A075B6K5 115 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.77□□□□□ -0.85
PTPRN-204ENST00000423636 CCL21O00585 134 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 SPINK4O60575 86 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 IGFBP2P18065 325 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 NBL1P41271 181 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 THBS3P49746 956 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 STUMQ69YW2 141 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 TMEM200BQ69YZ2 307 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 LINC00518Q8N0U6 118 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 TVP23CQ96ET8 276 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 POM121Q96HA1 1249 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 ACY3Q96HD9 319 aa9.77□□□□□ -0.85
PTPRN-204ENST00000423636 SGK494Q96LW2 274 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms