RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GNB4Q9HAV0 340 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 COA4Q9NYJ1 87 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 RABL2AQ9UBK7 228 aaPredicted RBP8.51□□□□□ -1.05
USP49-204ENST00000423567 ZMAT5Q9UDW3 170 aaKnown RBP8.51□□□□□ -1.05
USP49-204ENST00000423567 RABL2BQ9UNT1 228 aa8.51□□□□□ -1.05
USP49-204ENST00000423567 CCDC160A6NGH7 325 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 I3L521 148 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 GPR31O00270 319 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 RLN1P04808 185 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 LGALS1P09382 135 aaKnown RBP8.5□□□□□ -1.05
USP49-204ENST00000423567 NQO2P16083 231 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 GNRHRP30968 328 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 MAS1LP35410 378 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 TAS2R31P59538 309 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 ERVK-16P61578 105 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 SSBP2P81877 361 aaPredicted RBP8.5□□□□□ -1.05
USP49-204ENST00000423567 MRPS10P82664 201 aaKnown RBP8.5□□□□□ -1.05
USP49-204ENST00000423567 FHL3Q13643 280 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 KIAA0141Q14154 515 aaPredicted RBP8.5□□□□□ -1.05
USP49-204ENST00000423567 RNASE10Q5GAN6 216 aaKnown RBP8.5□□□□□ -1.05
USP49-204ENST00000423567 VAX1Q5SQQ9 334 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 FOXB2Q5VYV0 432 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 SSX9Q7RTT3 188 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 LAX1Q8IWV1 398 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 VKORC1L1Q8N0U8 176 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 OR4A5Q8NH83 315 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 ISOC1Q96CN7 298 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 DIRAS2Q96HU8 199 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 C6orf62Q9GZU0 229 aaPredicted RBP8.5□□□□□ -1.05
USP49-204ENST00000423567 HRASLSQ9HDD0 168 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
USP49-204ENST00000423567 DPPA5A6NC42 116 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 LINC01619G3V211 115 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 H3BMQ9 156 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 CTDSP2O14595 271 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 PLXNB1O43157 2135 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 RAMP3O60896 148 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 IGHV3-11P01762 117 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 OR9G9P0C7N8 305 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 APELAP0DMC3 54 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 TBPP20226 339 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 BRWD1-AS2P59051 145 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 RPL8P62917 257 aaKnown RBP8.49□□□□□ -1.05
USP49-204ENST00000423567 IL18Q14116 193 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 SLC25A42Q86VD7 318 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 SLC38A6Q8IZM9 456 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 PUSL1Q8N0Z8 303 aaKnown RBP8.49□□□□□ -1.05
USP49-204ENST00000423567 DMBX1Q8NFW5 382 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 OR52I2Q8NH67 350 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 TMEM167AQ8TBQ9 72 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 DYNC2LI1Q8TCX1 351 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 FXYD6Q9H0Q3 95 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 PLEKHA2Q9HB19 425 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 KLK11Q9UBX7 282 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 MTFP1Q9UDX5 166 aa8.49□□□□□ -1.05
USP49-204ENST00000423567 NOTCH3Q9UM47 2321 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 SEC14L6B5MCN3 397 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 GABARAPH6UMI1 98 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 M0QYG6 137 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 PGLYRP1O75594 196 aaPredicted RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 BRI3O95415 125 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 PRB2P02812 416 aaPredicted RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 HSPB1P04792 205 aaKnown RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 F2RP25116 425 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 RPL27AP46776 148 aaKnown RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 TAS2R19P59542 299 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 SSBP1Q04837 148 aaKnown RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 C9orf66Q5T8R8 295 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 ASPHD1Q5U4P2 390 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 OR4A47Q6IF82 309 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 ARRDC1Q8N5I2 433 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 DGCR14Q96DF8 476 aaKnown RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 USMG5Q96IX5 58 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 FYTTD1Q96QD9 318 aaKnown RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 ABHD1Q96SE0 405 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 TINAGL1Q9GZM7 467 aaPredicted RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 ALX4Q9H161 411 aaPredicted RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 MIXL1Q9H2W2 232 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 RANGRFQ9HD47 186 aaPredicted RBP8.48□□□□□ -1.05
USP49-204ENST00000423567 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 COMMD9Q9P000 198 aa8.48□□□□□ -1.05
USP49-204ENST00000423567 S1PR2O95136 353 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 DHFRP00374 187 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 CD3DP04234 171 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 PGAM2P15259 253 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 HLA-GP17693 338 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 HOXD3P31249 432 aaPredicted RBP8.47□□□□□ -1.05
USP49-204ENST00000423567 LPAR6P43657 344 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 UCP3P55916 312 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 POU2AF1Q16633 256 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 PHLDA2Q53GA4 152 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 C10orf55Q5SWW7 151 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 TTC9CQ8N5M4 171 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 TMEM229BQ8NBD8 167 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 MCFD2Q8NI22 146 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 MRAPQ8TCY5 172 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 COMMD5Q9GZQ3 224 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 TMEM140Q9NV12 185 aa8.47□□□□□ -1.05
USP49-204ENST00000423567 AURKAIP1Q9NWT8 199 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms