RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 A0A0A6YYH2 397 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 A6NJ64 397 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 OR2J3O76001 311 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 ATP6V1G2O95670 118 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 DHFRP00374 187 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 HRASP01112 189 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 ZNF735P0CB33 412 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 SDC2P34741 201 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 MECP2P51608 486 aaKnown RBP8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 HAGHQ16775 308 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 ZNF773Q6PK81 442 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 BEST4Q8NFU0 473 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 SLC25A38Q96DW6 304 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 SLC2A9Q9NRM0 540 aa8.76□□□□□ -1.01
SQSTM1-203ENST00000422245 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 HMX3A6NHT5 357 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 RBFOX2O43251 390 aaKnown RBP eCLIP8.75□□□□□ -1.016e-19■□□□□ 9.3
SQSTM1-203ENST00000422245 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 TPPPO94811 219 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 IFNA6P05013 189 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 IL6RP08887 468 aaPredicted RBP8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 CD81P60033 236 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 RPL8P62917 257 aaKnown RBP8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 MXD1Q05195 221 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 HOGA1Q86XE5 327 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 ZBTB34Q8NCN2 500 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 OR13F1Q8NGS4 319 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 OR4A5Q8NH83 315 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 FYTTD1Q96QD9 318 aaKnown RBP8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 AIFM2Q9BRQ8 373 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 SLC2A8Q9NY64 477 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 TECRQ9NZ01 308 aaKnown RBP8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 FBXL7Q9UJT9 491 aa8.75□□□□□ -1.01
SQSTM1-203ENST00000422245 TRAV18A0A075B6X5 111 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 LOC100506127A0A0U1RQW1 187 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 LCE6AA0A183 80 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 C2orf70A6NJV1 201 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 PPP5D1E7EU14 171 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 LGALS9O00182 355 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 TMEM127O75204 238 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 PPYP01298 95 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 CRYGCP07315 174 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 AREGP15514 252 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 HIST1H1BP16401 226 aaKnown RBP8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 HLA-GP17693 338 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 PSMB6P28072 239 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 FCGR2CP31995 323 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 BRWD1-AS2P59051 145 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 CATR1Q13166 79 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 KLK9Q2XQG4 91 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 TIMM50Q3ZCQ8 353 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 IDNKQ5T6J7 187 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 ZFAND6Q6FIF0 208 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 ADAMTSL5Q6ZMM2 481 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 SECTM1Q8WVN6 248 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 EEF1AKMT3Q96AZ1 226 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 NEURL2Q9BR09 285 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 PLEKHA3Q9HB20 300 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 ZC4H2Q9NQZ6 224 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 BET1LQ9NYM9 111 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 KLK9Q9UKQ9 250 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 CEPT1Q9Y6K0 416 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 TENM2Q9NT68 2774 aa8.74□□□□□ -1.01
SQSTM1-203ENST00000422245 A0A1B0GW64 132 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 A8MWP6 167 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 TNFSF12O43508 249 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 FGF2P09038 288 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 CLEC2LP0C7M8 214 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 FOLR2P14207 255 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 CTRB1P17538 263 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 ARL3P36405 182 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 CBX5P45973 191 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 TAS2R31P59538 309 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 DEFB114Q30KQ6 69 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 OR4A47Q6IF82 309 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 SSX9Q7RTT3 188 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 GPHB5Q86YW7 130 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 SPAG16Q8N0X2 631 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 GVQW1Q8N7I0 195 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 OR5H6Q8NGV6 325 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 SLC5A7Q9GZV3 580 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 AUNIPQ9H7T9 357 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 HRASLSQ9HDD0 168 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 DIABLOQ9NR28 239 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 CCL28Q9NRJ3 127 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 DMRT1Q9Y5R6 373 aa8.73□□□□□ -1.01
SQSTM1-203ENST00000422245 STARD9Q9P2P6 4700 aa8.72□□□□□ -1.01
SQSTM1-203ENST00000422245 E7EUB6 86 aa8.72□□□□□ -1.01
SQSTM1-203ENST00000422245 NDUFB8O95169 186 aa8.72□□□□□ -1.01
SQSTM1-203ENST00000422245 OR2C1O95371 312 aa8.72□□□□□ -1.01
SQSTM1-203ENST00000422245 HLA-AP01891 365 aaKnown RBP8.72□□□□□ -1.01
SQSTM1-203ENST00000422245 DEFA4P12838 97 aa8.72□□□□□ -1.01
SQSTM1-203ENST00000422245 POU2AF1Q16633 256 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms