RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 FAM166AQ6J272 317 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 OR4P4Q8NGL7 312 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 OR1L6Q8NGR2 347 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 TMEM133Q9H2Q1 129 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
CMSS1-201ENST00000421999 SMCO4Q9NRQ5 59 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 U3KQ87 197 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 USP9XQ93008 2570 aaPredicted RBP8.13□□□□□ -1.11
CMSS1-201ENST00000421999 A0A1W2PRX2 142 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 MLNRO43193 412 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 TRGV3P03979 118 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 GRNP28799 593 aaKnown RBP8.13□□□□□ -1.11
CMSS1-201ENST00000421999 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
CMSS1-201ENST00000421999 FBLN5Q9UBX5 448 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 TCF19Q9Y242 345 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 DUXBA0A1W2PPF3 345 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 PSG5Q15238 335 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 FAM106AQ4KMX7 169 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 Q5PR19 223 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 BRD3OSQ6XYD6 125 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 SEM1Q6ZVN7 128 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 ZNF680Q8NEM1 530 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 NUP37Q8NFH4 326 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 GPR146Q96CH1 333 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 MRPL20Q9BYC9 149 aaKnown RBP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 C19orf12Q9NSK7 152 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 OPN4Q9UHM6 478 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 TNRC18O15417 2968 aaPredicted RBP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 CORTO00230 105 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 ACAA1P09110 424 aaPredicted RBP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 HLA-GP17693 338 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 OR10J1P30954 320 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 P2RY1P47900 373 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 EWSR1Q01844 656 aaKnown RBP eCLIP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 RPEL1Q2QD12 228 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 PDPNQ86YL7 162 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 OR11H7Q8NGC8 314 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 SAMD10Q9BYL1 202 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 S4R3C0 116 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 DBX1A6NMT0 343 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 VCANP13611 3396 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 MIDNQ504T8 468 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 FAM89BQ8N5H3 189 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 OR4X2Q8NGF9 303 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 PFDN5Q99471 154 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 BPTFQ12830 3046 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 FLNBO75369 2602 aaKnown RBP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 TRAV24A0A0B4J272 114 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 TCTE3Q8IZS6 198 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 CABLES2Q9BTV7 478 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 CHRDL1Q9BU40 450 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 NPVFQ9HCQ7 196 aa8.12□□□□□ -1.11
CMSS1-201ENST00000421999 TECRQ9NZ01 308 aaKnown RBP8.12□□□□□ -1.11
CMSS1-201ENST00000421999 OR2J3O76001 311 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 PAX6P26367 422 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 CD1BP29016 333 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 MFAP4P55083 255 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 PAX5Q02548 391 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 HMGN3Q15651 99 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 C10orf113Q5VZT2 155 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 LSM10Q969L4 123 aaKnown RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 ATP5SQ99766 215 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 SOSTQ9BQB4 213 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 FAM103A1Q9BTL3 118 aaKnown RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 ALX4Q9H161 411 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 C5orf66Q9H5L9 145 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 ZNF581Q9P0T4 197 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 KIAA1324LA8MWY0 1029 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 CHEK1O14757 476 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 CD74P04233 296 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 SMIM17P0DL12 118 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 ZNF90Q03938 601 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 TMEM41BQ5BJD5 291 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 Q71RC1 249 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 C16orf82Q7Z2V1 217 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 FAM169BQ8N8A8 192 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 MRPL30Q8TCC3 161 aaKnown RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 ST6GAL2Q96JF0 529 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 SAV1Q9H4B6 383 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 EYSQ5T1H1 3165 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 MED12LQ86YW9 2145 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 KRBOX1C9JBD0 128 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 PSPNO60542 156 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 HYPMO75409 117 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 ATP5G2Q06055 141 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 OSR1Q8TAX0 266 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-201ENST00000421999 GAB2Q9UQC2 676 aa8.11□□□□□ -1.11
CMSS1-201ENST00000421999 C7orf66A4D0T2 115 aa8.1□□□□□ -1.11
CMSS1-201ENST00000421999 IGHV3-11P01762 117 aa8.1□□□□□ -1.11
CMSS1-201ENST00000421999 LINC00869P0C866 280 aa8.1□□□□□ -1.11
CMSS1-201ENST00000421999 RD3LP0DJH9 198 aa8.1□□□□□ -1.11
CMSS1-201ENST00000421999 ZNF250P15622 560 aa8.1□□□□□ -1.11
CMSS1-201ENST00000421999 GALR1P47211 349 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms