RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 MS4A5Q9H3V2 200 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 GP6Q9HCN6 339 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 CXorf1O96002 111 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 OPRK1P41145 380 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 GNG10P50151 68 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 PDLIM3Q53GG5 364 aaPredicted RBP17.68■□□□□ 0.42
USP48-205ENST00000421625 CXorf67Q86X51 503 aaPredicted RBP17.68■□□□□ 0.42
USP48-205ENST00000421625 GGTLC1Q9BX51 225 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 OPN3Q9H1Y3 402 aaPredicted RBP17.68■□□□□ 0.42
USP48-205ENST00000421625 ZNF703Q9H7S9 590 aaPredicted RBP17.68■□□□□ 0.42
USP48-205ENST00000421625 BOKQ9UMX3 212 aaPredicted RBP17.68■□□□□ 0.42
USP48-205ENST00000421625 SSTR5P35346 364 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 SPATA31B1PQ5VZV4 182 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 Q6ZR03 302 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 ARL6IP6Q8N6S5 226 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 Q8N976 141 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 SSMEM1Q8WWF3 244 aa17.68■□□□□ 0.42
USP48-205ENST00000421625 NBEAQ8NFP9 2946 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 TDGF1P13385 188 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 RFESDQ8TAC1 157 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 GNB4Q9HAV0 340 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 CELA3BP08861 270 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 COQ2Q96H96 371 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 PSG11Q9UQ72 335 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 OOEPA6NGQ2 149 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 SPINK4O60575 86 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 MAGEA5P43359 124 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 GABRA2P47869 451 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 RAB7AP51149 207 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 ZNF826PQ6ZT77 177 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 SIGLECL1Q8N7X8 197 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 TXNDC17Q9BRA2 123 aa17.67■□□□□ 0.42
USP48-205ENST00000421625 Q0VG73 95 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 MMDQ15546 238 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 MMD2Q8IY49 270 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 ST6GALNAC3Q8NDV1 305 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 CHODLQ9H9P2 273 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 WISP2O76076 250 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 OR1C1Q15619 314 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 COL5A1-AS1Q5SY13 56 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 C1orf210Q8IVY1 113 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 OR8I2Q8N0Y5 310 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 PLPPR2Q96GM1 343 aa17.66■□□□□ 0.42
USP48-205ENST00000421625 DIRC3C9JPN6 131 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 SIAH2O43255 324 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 FOXH1O75593 365 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 GPX1P07203 203 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 GCHFRP30047 84 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 VKORC1L1Q8N0U8 176 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 C11orf42Q8N5U0 333 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 SEPSECSQ9HD40 501 aaKnown RBP17.65■□□□□ 0.42
USP48-205ENST00000421625 HCFC1P51610 2035 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 TRAV9-1A0A075B6T8 112 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 LTC4SQ16873 150 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 RPEL1Q2QD12 228 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 KIAA1644Q3SXP7 199 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 LOXL2Q9Y4K0 774 aa17.65■□□□□ 0.42
USP48-205ENST00000421625 TBL2Q9Y4P3 447 aaKnown RBP17.65■□□□□ 0.42
USP48-205ENST00000421625 TCF21O43680 179 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 MPDU1O75352 247 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 ZNF766Q5HY98 468 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 C1orf159Q96HA4 380 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 EAF1Q96JC9 268 aaPredicted RBP17.64■□□□□ 0.41
USP48-205ENST00000421625 HEYLQ9NQ87 328 aaPredicted RBP17.64■□□□□ 0.41
USP48-205ENST00000421625 CHRNB4P30926 498 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 ABHD12Q8N2K0 398 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 OR4B1Q8NGF8 309 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 GMPPAQ96IJ6 420 aaPredicted RBP17.64■□□□□ 0.41
USP48-205ENST00000421625 V9GYV3 84 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 PTPRBP23467 1997 aa17.64■□□□□ 0.41
USP48-205ENST00000421625 PRSS46E5RG02 174 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 FCGR3BO75015 233 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 FOXF2Q12947 444 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 SPATA45Q537H7 98 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 SLC35E4Q6ICL7 350 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 RCHY1Q96PM5 261 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 FAM234AQ9H0X4 552 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 DNAJC4Q9NNZ3 241 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 NTN3O00634 580 aaPredicted RBP17.63■□□□□ 0.41
USP48-205ENST00000421625 CTRLP40313 264 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 PRAMEF5Q5TYX0 476 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 PRAMEF6Q5VXH4 476 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 OR13A1Q8NGR1 328 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 Q8TCH9 128 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 DCTN5Q9BTE1 182 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 ZNF586Q9NXT0 402 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 METRNQ9UJH8 293 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 ZFP30Q9Y2G7 519 aa17.63■□□□□ 0.41
USP48-205ENST00000421625 TET2Q6N021 2002 aaPredicted RBP17.63■□□□□ 0.41
USP48-205ENST00000421625 SMPD2O60906 423 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 SLC35B1P78383 322 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 TRA2AQ13595 282 aaKnown RBP eCLIP17.62■□□□□ 0.41
USP48-205ENST00000421625 BCL2L2Q92843 193 aaPredicted RBP17.62■□□□□ 0.41
USP48-205ENST00000421625 HSD17B10Q99714 261 aaKnown RBP17.62■□□□□ 0.41
USP48-205ENST00000421625 FAM173AQ9BQD7 235 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 NRN1Q9NPD7 142 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 A8MXE2 369 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 C1orf174Q8IYL3 243 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 TCTEX1D1Q8N7M0 179 aa17.62■□□□□ 0.41
USP48-205ENST00000421625 STPG4Q8N801 248 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms