RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 LYNX1G3V0Z9 82 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 LYNX1P0DP58 116 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 GATA3P23771 443 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 WNT5AP41221 380 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 HLA-DRB5Q30154 266 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 FAM169BQ8N8A8 192 aa9.05□□□□□ -0.96
PTCH1-206ENST00000421141 LINC00869P0C866 280 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 EWSR1Q01844 656 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTCH1-206ENST00000421141 ZNF429Q86V71 674 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 SIGLECL1Q8N7X8 197 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 RPL39P5Q59GN2 51 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 Q5PR19 223 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 UTRNP46939 3433 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 FABP9Q0Z7S8 132 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 PRNTQ86SH4 94 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 RELL2Q8NC24 303 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-206ENST00000421141 MIXL1Q9H2W2 232 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 TMEM178BH3BS89 294 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 TNFRSF9Q07011 255 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 KIAA0141Q14154 515 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-206ENST00000421141 GUK1Q16774 197 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 C3orf36Q3SXR2 165 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 NCMAPQ5T1S8 102 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 GBGT1Q8N5D6 347 aa9.04□□□□□ -0.96
PTCH1-206ENST00000421141 RGS13O14921 159 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 NBR2O15453 112 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 GATCO43716 136 aaKnown RBP9.03□□□□□ -0.96
PTCH1-206ENST00000421141 CRYGSP22914 178 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 OR10J1P30954 320 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 LRP4O75096 1905 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 OR2T8A6NH00 312 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 DEDDO75618 318 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 WNT2P09544 360 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 MYOD1P15172 320 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 MAS1LP35410 378 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 AMTP48728 403 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 LRP11Q86VZ4 500 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 OR4B1Q8NGF8 309 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 PXMP4Q9Y6I8 212 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 NTF3P20783 257 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 SLC35B3Q9H1N7 401 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 MFSD2BA6NFX1 497 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 TGOLN2O43493 480 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 ZNF680Q8NEM1 530 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 FBXL15Q9H469 300 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 PTBP3O95758 552 aaKnown RBP9.03□□□□□ -0.96
PTCH1-206ENST00000421141 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 TMEM14DPA8MWL7 114 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
PTCH1-206ENST00000421141 UBE2L6O14933 153 aa9.02□□□□□ -0.96
PTCH1-206ENST00000421141 UCP3P55916 312 aa9.02□□□□□ -0.96
PTCH1-206ENST00000421141 RIGQ13278 110 aa9.02□□□□□ -0.96
PTCH1-206ENST00000421141 SPANXN1Q5VSR9 72 aa9.02□□□□□ -0.96
PTCH1-206ENST00000421141 ACACBO00763 2458 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 YPEL1O60688 119 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 G0S2P27469 103 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 FCER1GP30273 86 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 YPEL2Q96QA6 119 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 SIGLEC5O15389 551 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 CLEC9AQ6UXN8 241 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 C12orf77C9JDV5 145 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 MGPP08493 103 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 RANP62826 216 aaKnown RBP9.02□□□□□ -0.97
PTCH1-206ENST00000421141 HCFC1P51610 2035 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 CGB1A6NKQ9 187 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 FAM157CP0CG43 387 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 SERF2P84101 59 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 TEX261Q6UWH6 196 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 C3orf56Q8N813 242 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 KIAA1549Q9HCM3 1950 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 B3GALT5-AS1P59052 145 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 FAM74A3Q4VXF1 159 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF474Q6S9Z5 364 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
PTCH1-206ENST00000421141 Q96MF0 132 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-206ENST00000421141 SFTA3P0C7M3 94 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 RND2P52198 227 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 CD200R1LQ6Q8B3 271 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 FAM216AQ8WUB2 273 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 DNAJC4Q9NNZ3 241 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 CTXND1A0A1B0GTU2 59 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 M0R1W7 72 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 ADAM11O75078 769 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 TMEM255AQ5JRV8 349 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 SELENOHQ8IZQ5 122 aaKnown RBP9.01□□□□□ -0.97
PTCH1-206ENST00000421141 OR13A1Q8NGR1 328 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 SLC2A8Q9NY64 477 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 SRSF10O75494 262 aaKnown RBP9.01□□□□□ -0.97
PTCH1-206ENST00000421141 MINOS1Q5TGZ0 78 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 NXF2Q9GZY0 626 aaKnown RBP9.01□□□□□ -0.97
PTCH1-206ENST00000421141 ALX4Q9H161 411 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-206ENST00000421141 VAX2Q9UIW0 290 aa9.01□□□□□ -0.97
PTCH1-206ENST00000421141 FBXL7Q9UJT9 491 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms