RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 NEU4Q8WWR8 484 aaPredicted RBP12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 H0Y8G0 127 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 ARL14EPLP0DKL9 152 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 AGAP20933 346 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 WDR82Q6UXN9 313 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 FAM122AQ96E09 287 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 NABP2Q9BQ15 211 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 CEP290O15078 2479 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 PPIAL4CA0A0B4J2A2 164 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 M0R2Z0 102 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 PPIAL4GP0DN37 164 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 SUPT4H1P63272 117 aaKnown RBP12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 PCSK4Q6UW60 755 aa12.47□□□□□ -0.41
AP000550.1-201ENST00000420508 ORM1P02763 201 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 IER3P46695 156 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 PSG9Q00887 426 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 STPG3Q8N7X2 389 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 WNT9BO14905 357 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 IGHG3P01860 377 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 LINC00518Q8N0U6 118 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 G0S2P27469 103 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 MFAP4P55083 255 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 IFI27L2Q9H2X8 130 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 ASCC3Q8N3C0 2202 aaKnown RBP12.46□□□□□ -0.41
AP000550.1-201ENST00000420508 DNASE2O00115 360 aaPredicted RBP12.46□□□□□ -0.42
AP000550.1-201ENST00000420508 OR51M1Q9H341 326 aa12.46□□□□□ -0.42
AP000550.1-201ENST00000420508 GSX1Q9H4S2 264 aaPredicted RBP12.46□□□□□ -0.42
AP000550.1-201ENST00000420508 FREM3P0C091 2139 aa12.46□□□□□ -0.42
AP000550.1-201ENST00000420508 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 TRGC2P03986 189 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 CAMPP49913 170 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 TNFRSF14Q92956 283 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 STARD4Q96DR4 205 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 HSPB7Q9UBY9 170 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 IGKV1D-13A0A0B4J2D9 117 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 C17orf100A8MU93 164 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 GDF9O60383 454 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 IGKV1-13P0DP09 117 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 CD99P14209 185 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 KLHDC3Q9BQ90 382 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 MAP1LC3CQ9BXW4 147 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 PARD6GQ9BYG4 376 aaPredicted RBP12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 UBTD1Q9HAC8 227 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 A0A087X0M5 115 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 TRAV20A0A0B4J274 112 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 A0A1B0GX30 115 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 IL6RP08887 468 aaPredicted RBP12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 REG1BP48304 166 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 SMUG1Q53HV7 270 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 C5orf17Q8NAS9 161 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 AMY1AP04745 511 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 WNT5AP41221 380 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 RND2P52198 227 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 Q0VFX4 171 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 RNFT1Q5M7Z0 435 aa12.45□□□□□ -0.42
AP000550.1-201ENST00000420508 CD5P06127 495 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 OR4A47Q6IF82 309 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 CYTL1Q9NRR1 136 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 IGKV1-27A0A075B6S5 117 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 ACAA1P09110 424 aaPredicted RBP12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 FHITP49789 147 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 FBLL1A6NHQ2 334 aaKnown RBP12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 BMPR1BO00238 502 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 CA2P00918 260 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 CYB5R2Q6BCY4 276 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 COLCA1Q6ZS62 124 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 FGFBP3Q8TAT2 258 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 IGKV1D-8A0A087WSZ0 117 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 SLC25A17O43808 307 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 GPHA2Q96T91 129 aa12.44□□□□□ -0.42
AP000550.1-201ENST00000420508 RD3LP0DJH9 198 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 ID4P47928 161 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 MUC15Q8N387 334 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 TMEM242Q9NWH2 141 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 BET1LQ9NYM9 111 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 SPINK4O60575 86 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 MORN2Q502X0 79 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 MRPL54Q6P161 138 aaKnown RBP12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 ZNF383Q8NA42 475 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 SOX21Q9Y651 276 aaPredicted RBP12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 RPL7P18124 248 aaKnown RBP12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 GUCD1Q96NT3 240 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 FOLR2P14207 255 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 TCL1AP56279 114 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 C3orf36Q3SXR2 165 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
AP000550.1-201ENST00000420508 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms