RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 SMIM21Q3B7S5 101 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 IMMP2LQ96T52 175 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 CXXC4Q9H2H0 198 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 ZDHHC11Q9H8X9 412 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 HES4Q9HCC6 221 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 KCNIP2Q9NS61 270 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 TRAV3A0A0B4J244 114 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 C21orf140B9A014 251 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 ERVK-16P61578 105 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 Q8N7P7 452 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 MDS2Q8NDY4 140 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 LRRC29Q8WV35 223 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 C2orf88Q9BSF0 95 aa12.61□□□□□ -0.39
SEMA3B-203ENST00000419007 LEAP2Q969E1 77 aa12.6□□□□□ -0.39
SEMA3B-203ENST00000419007 ZNF90Q03938 601 aa12.6□□□□□ -0.39
SEMA3B-203ENST00000419007 GMPPAQ96IJ6 420 aaPredicted RBP12.6□□□□□ -0.39
SEMA3B-203ENST00000419007 ZNF318Q5VUA4 2279 aa12.6□□□□□ -0.39
SEMA3B-203ENST00000419007 BOD1L1Q8NFC6 3051 aa12.6□□□□□ -0.39
SEMA3B-203ENST00000419007 J3QW42 95 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 SLC17A3O00476 420 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 TCAPO15273 167 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 TNFSF15O95150 251 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 CBLN1P23435 193 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 DUTP33316 252 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 ADMP35318 185 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 RPL15P61313 204 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 DHRS13Q6UX07 377 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 OCC1Q8TAD7 63 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 FER1L6-AS2Q96M78 137 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 TNCP24821 2201 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 IGHV3OR15-7A0A075B7D8 119 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 RBM14Q96PK6 669 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 MGST2Q99735 147 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 PROP1O75360 226 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 PAX1P15863 534 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 RPP30P78346 268 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 CD177Q8N6Q3 437 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 OR2Z1Q8NG97 314 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
SEMA3B-203ENST00000419007 WISP2O76076 250 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 G0S2P27469 103 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 PRDX2P32119 198 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 SPCS3P61009 180 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 GGTLC1Q9BX51 225 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 ZFHX4Q86UP3 3567 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 ROS1P08922 2347 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 TMPRSS2O15393 492 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 ACTL6BO94805 426 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 HPRT1P00492 218 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 LBHQ53QV2 105 aaPredicted RBP12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 SPATA31B1PQ5VZV4 182 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 INO80CQ6PI98 192 aaPredicted RBP12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 NAGKQ9UJ70 344 aa12.58□□□□□ -0.4
SEMA3B-203ENST00000419007 SPINK4O60575 86 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 CXorf1O96002 111 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 RPL31P62899 125 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 CMTM2Q8TAZ6 248 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 Q8TCH9 128 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 TBX15Q96SF7 602 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 DIRC2Q96SL1 478 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 S1PR3Q99500 378 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 YTHDF2Q9Y5A9 579 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 CD99P14209 185 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 SOX8P57073 446 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 VWA1Q6PCB0 445 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 FAM214BQ7L5A3 538 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 PCNX2A6NKB5 2137 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 ADH4P08319 380 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 OPRK1P41145 380 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 FOXL1Q12952 345 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 ZNRF1Q8ND25 227 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 ZNF292O60281 2723 aa12.57□□□□□ -0.4
SEMA3B-203ENST00000419007 CECR9P0C854 216 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 HLA-DRB5Q30154 266 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 BEND2Q8NDZ0 799 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 SNHG12Q9BXW3 62 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 POLR3KQ9Y2Y1 108 aaPredicted RBP12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 CFAP47Q6ZTR5 3102 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 MPDU1O75352 247 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 FOXH1O75593 365 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 TIMP3P35625 211 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms