RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ANKRD13BQ86YJ7 626 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 OR6Q1Q8NGQ2 317 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 OR5H2Q8NGV7 314 aa12.64□□□□□ -0.39
LINC00404-201ENST00000418660 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 FAM223BA6NKX1 122 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 TEX22C9J3V5 150 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 GABARAPO95166 117 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 HPRT1P00492 218 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 GNRHRP30968 328 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 RPL27AP46776 148 aaKnown RBP12.63□□□□□ -0.39
LINC00404-201ENST00000418660 RHOGP84095 191 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 ZNF45Q02386 682 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 KLF5Q13887 457 aaPredicted RBP12.63□□□□□ -0.39
LINC00404-201ENST00000418660 CTF1Q16619 201 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 VAX1Q5SQQ9 334 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 SSX9Q7RTT3 188 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 LYSMD2Q8IV50 215 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 FAM223AQ8IWN6 122 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 OR4A5Q8NH83 315 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 GPX8Q8TED1 209 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 MOB3AQ96BX8 217 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 ZNF2Q9BSG1 426 aaPredicted RBP12.63□□□□□ -0.39
LINC00404-201ENST00000418660 AKIP1Q9NQ31 210 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 BET1LQ9NYM9 111 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 ADAM30Q9UKF2 790 aa12.63□□□□□ -0.39
LINC00404-201ENST00000418660 HMX3A6NHT5 357 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 HPGDSO60760 199 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 PRH1P02810 166 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 IL6RP08887 468 aaPredicted RBP12.62□□□□□ -0.39
LINC00404-201ENST00000418660 ZNF735P0CB33 412 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 SPNP16150 400 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 ELK1P19419 428 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 TAS2R31P59538 309 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 RPL8P62917 257 aaKnown RBP12.62□□□□□ -0.39
LINC00404-201ENST00000418660 ATP5G2Q06055 141 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 POU2AF1Q16633 256 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 OR4A47Q6IF82 309 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 C11orf87Q6NUJ2 197 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 OR6F1Q8NGZ6 308 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 CD300LFQ8TDQ1 290 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 NAA50Q9GZZ1 169 aaKnown RBP12.62□□□□□ -0.39
LINC00404-201ENST00000418660 SCPEP1Q9HB40 452 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 ZNF257Q9Y2Q1 563 aa12.62□□□□□ -0.39
LINC00404-201ENST00000418660 NPIPB5A8MRT5 1133 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 E7EUB6 86 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 TRBV12-3P01733 135 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 NHLRC4P0CG21 123 aaPredicted RBP12.61□□□□□ -0.39
LINC00404-201ENST00000418660 NQO2P16083 231 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 HLA-GP17693 338 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 TATDN3Q17R31 274 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 AADACL3Q5VUY0 350 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 MZT2AQ6P582 158 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 SNX29P2Q8IUI4 249 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 FYTTD1Q96QD9 318 aaKnown RBP12.61□□□□□ -0.39
LINC00404-201ENST00000418660 PLEKHA2Q9HB19 425 aa12.61□□□□□ -0.39
LINC00404-201ENST00000418660 A0A1B0GW64 132 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 DPPA5A6NC42 116 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 GP9P14770 177 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 ZNF182P17025 639 aaPredicted RBP12.6□□□□□ -0.39
LINC00404-201ENST00000418660 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 HRH1P35367 487 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 SYNJ2BPP57105 145 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 EXOSC2Q13868 293 aaKnown RBP12.6□□□□□ -0.39
LINC00404-201ENST00000418660 RPEL1Q2QD12 228 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 GPR107Q5VW38 600 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 OR9G4Q8NGQ1 327 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 AP3S1Q92572 193 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 MRPS26Q9BYN8 205 aaKnown RBP12.6□□□□□ -0.39
LINC00404-201ENST00000418660 HRASLSQ9HDD0 168 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 SMAD5-AS1Q9Y6J3 95 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 TNCP24821 2201 aa12.6□□□□□ -0.39
LINC00404-201ENST00000418660 UPK2O00526 184 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 PGLYRP1O75594 196 aaPredicted RBP12.59□□□□□ -0.39
LINC00404-201ENST00000418660 OR2J3O76001 311 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 IGLV1-51P01701 117 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 CRYGCP07315 174 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 RCVRNP35243 200 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 FAM209BQ5JX69 171 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 CMTM1Q8IZ96 169 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 RSRP1Q9BUV0 290 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 FXYD6Q9H0Q3 95 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 COMMD9Q9P000 198 aa12.59□□□□□ -0.39
LINC00404-201ENST00000418660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.58□□□□□ -0.4
LINC00404-201ENST00000418660 CGB1A6NKQ9 187 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 FAM25AB3EWG3 89 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 FAM25CB3EWG5 89 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 FAM25GB3EWG6 89 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 GPR31O00270 319 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 S1PR2O95136 353 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 DHFRP00374 187 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 RLN1P04808 185 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 FGF2P09038 288 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 MYOD1P15172 320 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 AREGP15514 252 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 F2RP25116 425 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 PSMB6P28072 239 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms