RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 AZU1P20160 251 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 MDH2P40926 338 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 PPICP45877 212 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 TFPI2P48307 235 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 TAS2R20P59543 309 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 BTN3A2P78410 334 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 GAGE5Q13069 117 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 GAGE6Q13070 117 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 GABRA6Q16445 453 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 LTC4SQ16873 150 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ARHGAP11BQ3KRB8 267 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ACSM3Q53FZ2 586 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 TMEM41BQ5BJD5 291 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 PDZD11Q5EBL8 140 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 FAM78BQ5VT40 261 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 AADACL3Q5VUY0 350 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ZFAND6Q6FIF0 208 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 UFSP1Q6NVU6 142 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 Q6ZRG5 221 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 FA2HQ7L5A8 372 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 OLIG3Q7RTU3 272 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 C1orf174Q8IYL3 243 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 DEFB125Q8N687 156 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 TCTEX1D1Q8N7M0 179 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 SUMF2Q8NBJ7 301 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 OR52E5Q8NH55 327 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 PPP1R1CQ8WVI7 109 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 DCUN1D4Q92564 292 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 FAM46BQ96A09 425 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 PTX4Q96A99 478 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 SLC35G5Q96KT7 338 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 PANX1Q96RD7 426 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 GINS3Q9BRX5 216 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 SLC25A37Q9NYZ2 338 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 DNAJC27Q9NZQ0 273 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 PSG8Q9UQ74 426 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 RASD1Q9Y272 281 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ALPK2Q86TB3 2170 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 NINQ8N4C6 2090 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 STAB2Q8WWQ8 2551 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 TRBV5-7A0A0A0MS05 114 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 A0A1B0GU03 582 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 hCG_38984A0A1B0GV85 526 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 WI2-2373I1.2A0A1W2PRP0 233 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 PAGE4O60829 102 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 SCGB2A1O75556 95 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 CTSDP07339 412 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 MMP7P09237 267 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 LIMS3P0CW19 117 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 LIMS4P0CW20 117 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 AKAIN1P0CW23 69 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 PGA4P0DJD7 388 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 PGA5P0DJD9 388 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 PSG1P11464 419 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 HTR6P50406 440 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 GPM6AP51674 278 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 CLDN15P56746 228 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 OR12D2P58182 307 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 TPPP2P59282 170 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 TAS2R41P59536 307 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 PLP1P60201 277 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 S100A10P60903 97 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 LCN2P80188 198 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 RPL24P83731 157 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 HSD52Q0P140 79 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 FOXF1Q12946 379 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ENDOGQ14249 297 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 RNPS1Q15287 305 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 HIST3H3Q16695 136 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 SYT14P1Q58G82 188 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ACTL10Q5JWF8 245 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 TMEM182Q6ZP80 229 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 VN1R4Q7Z5H5 301 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 CENPVQ7Z7K6 275 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 KLHDC8AQ8IYD2 350 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF101Q8IZC7 436 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 CLDN19Q8N6F1 224 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ZSCAN4Q8NAM6 433 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 OR4L1Q8NH43 312 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 CLDND2Q8NHS1 167 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 OSR1Q8TAX0 266 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 WIPF2Q8TF74 440 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 MOAP1Q96BY2 351 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 MS4A10Q96PG2 267 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF607Q96SK3 696 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 NIPSNAP3BQ9BS92 247 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 PARLQ9H300 379 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ALG9Q9H6U8 611 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 HINT3Q9NQE9 182 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 C1RLQ9NZP8 487 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 MARCH4Q9P2E8 410 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 MTFP1Q9UDX5 166 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 ERG28Q9UKR5 140 aa4.5□□□□□ -1.69
ECHDC1-206ENST00000417628 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-206ENST00000417628 MAP1LC3B2A6NCE7 125 aa4.49□□□□□ -1.69
ECHDC1-206ENST00000417628 H3BQ15 152 aa4.49□□□□□ -1.69
ECHDC1-206ENST00000417628 C15orf65H3BRN8 121 aa4.49□□□□□ -1.69
ECHDC1-206ENST00000417628 GEMIN2O14893 280 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-206ENST00000417628 SNAI2O43623 268 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms