RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 F8VVB4 439 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 F8VWA3 439 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BKO60814 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BJP06899 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BOP23527 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BBP33778 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 ZNF137PP52743 207 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BDP58876 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BCP62807 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST2H2BEQ16778 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.87□□□□□ -0.67
SCAF8-203ENST00000417268 DTX1Q86Y01 620 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 PDPNQ86YL7 162 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BHQ93079 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 RBM14Q96PK6 669 aaKnown RBP10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BNQ99877 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H2BMQ99879 126 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 ABHD14AQ9BUJ0 271 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HSPB8Q9UJY1 196 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 H0YIZ8 118 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 M0QZ24 198 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 A0A087WWC5 75 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 HPRT1P00492 218 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 TEPPQ6URK8 271 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 MISP3Q96FF7 219 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 PIMREGQ9BSJ6 248 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 SEBOXQ9HB31 216 aaPredicted RBP10.87□□□□□ -0.67
SCAF8-203ENST00000417268 ODAMA1E959 279 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 UQCRFS1P47985 274 aa10.87□□□□□ -0.67
SCAF8-203ENST00000417268 DOCK9Q9BZ29 2069 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 IGSF23A1L1A6 192 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 K7N7A8 449 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 CORTO00230 105 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 IZUMO4Q1ZYL8 232 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 LURAP1LQ8IV03 231 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
SCAF8-203ENST00000417268 KIAA1671Q9BY89 1806 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 A0A087WV48 116 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 HBZP02008 142 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 COL8A1P27658 744 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 PDLIM4P50479 330 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 AAMDCQ9H7C9 122 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 PLXNA2O75051 1894 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 IGHG3P01860 377 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 MELTFP08582 738 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 HIST1H1EP10412 219 aaKnown RBP10.86□□□□□ -0.67
SCAF8-203ENST00000417268 FOLR2P14207 255 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 TCTAP57738 103 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 PSG7Q13046 419 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 OR2T6Q8NHC8 308 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 Q96M66 194 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
SCAF8-203ENST00000417268 FAM157AC9JC47 383 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 RBP4P02753 201 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 PLSCR4Q9NRQ2 329 aa10.86□□□□□ -0.67
SCAF8-203ENST00000417268 CUL9Q8IWT3 2517 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 FANCMQ8IYD8 2048 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 A1L4Q6 167 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 PGLYRP1O75594 196 aaPredicted RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 COMPP49747 757 aaPredicted RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 PXMP4Q9Y6I8 212 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 HLA-DQA1P01909 254 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 EGR1P18146 543 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 NPY1RP25929 384 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 SRIP30626 198 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 PLP1P60201 277 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 NEU4Q8WWR8 484 aaPredicted RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 SPTBN1Q01082 2364 aaKnown RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 TMEM250H0YL14 139 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 CBLN1P23435 193 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 RASL11BQ9BPW5 248 aa10.85□□□□□ -0.67
SCAF8-203ENST00000417268 QTRT1Q9BXR0 403 aaKnown RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 HELZP42694 1942 aaKnown RBP10.85□□□□□ -0.67
SCAF8-203ENST00000417268 J3QRE1 110 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 TNXAQ16473 311 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 CCL19Q99731 98 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 CA2P00918 260 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 OTX1P32242 354 aaPredicted RBP10.84□□□□□ -0.67
SCAF8-203ENST00000417268 RPL13AP40429 203 aaKnown RBP10.84□□□□□ -0.67
SCAF8-203ENST00000417268 NPBWR2P48146 333 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 FOXF2Q12947 444 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 IBA57Q5T440 356 aaKnown RBP10.84□□□□□ -0.67
SCAF8-203ENST00000417268 HEPN1Q6WQI6 88 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 CELA3BP08861 270 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
SCAF8-203ENST00000417268 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 OR1B1Q8NGR6 318 aa10.84□□□□□ -0.67
SCAF8-203ENST00000417268 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms