RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TMEM167AQ8TBQ9 72 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 SRSF12Q8WXF0 261 aaKnown RBP14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 DGCR14Q96DF8 476 aaKnown RBP14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 PHB2Q99623 299 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 SPIN2AQ99865 258 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 SPIN2BQ9BPZ2 258 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 SLA2Q9H6Q3 261 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 VSIG4Q9Y279 399 aa14.04□□□□□ -0.16
SEMA3B-201ENST00000416295 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 H3BUA1 57 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 PGAM2P15259 253 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 MAS1LP35410 378 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 POU2AF1Q16633 256 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 ETV3LQ6ZN32 361 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 SSX9Q7RTT3 188 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 ZNF491Q8N8L2 437 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 WFDC9Q8NEX5 89 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 OR4D10Q8NGI6 311 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 ZNF486Q96H40 463 aaPredicted RBP14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 BET1LQ9NYM9 111 aa14.03□□□□□ -0.16
SEMA3B-201ENST00000416295 CCL24O00175 119 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 MPPED1O15442 326 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 S1PR2O95136 353 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 AKAIN1P0CW23 69 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 ERVK-16P61578 105 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 OR4A47Q6IF82 309 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 LINC00482Q8N8I6 264 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 TERB2Q8NHR7 220 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 HRASLSQ9HDD0 168 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 SLC2A9Q9NRM0 540 aa14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 FAM212BQ9NTI7 297 aaPredicted RBP14.02□□□□□ -0.17
SEMA3B-201ENST00000416295 DISC1C4P0D8 188 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 PLXNB1O43157 2135 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 ECI1P42126 302 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 TPPP2P59282 170 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 RPL8P62917 257 aaKnown RBP14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 RUNX1Q01196 453 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 KIAA0141Q14154 515 aaPredicted RBP14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 SCGB2B2Q4G0G5 96 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 ASPHD1Q5U4P2 390 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 TBC1D26Q86UD7 250 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 MRPL41Q8IXM3 137 aaKnown RBP14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 DMBX1Q8NFW5 382 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 ZFAND1Q8TCF1 268 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 CASTOR1Q8WTX7 329 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 RAX2Q96IS3 184 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 P2RX4Q99571 388 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 GNB4Q9HAV0 340 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 ZNF355PQ9NSJ1 428 aa14.01□□□□□ -0.17
SEMA3B-201ENST00000416295 ANKRD20A5PA0PJZ0 165 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 MARCH11A6NNE9 402 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 BRI3O95415 125 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 DUS4LO95620 317 aaKnown RBP14□□□□□ -0.17
SEMA3B-201ENST00000416295 TRGV3P03979 118 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 FGF2P09038 288 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 PTBP1P26599 531 aaKnown RBP eCLIP14□□□□□ -0.17
SEMA3B-201ENST00000416295 LPAR6P43657 344 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 PPP5CP53041 499 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 RND3P61587 244 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 DEFB136Q30KP8 78 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 PYDC2Q56P42 97 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 C10orf55Q5SWW7 151 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 OR5T1Q8NG75 326 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 RCC1LQ96I51 464 aaKnown RBP14□□□□□ -0.17
SEMA3B-201ENST00000416295 MS4A10Q96PG2 267 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 TMEM140Q9NV12 185 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 V9GYH0 126 aa14□□□□□ -0.17
SEMA3B-201ENST00000416295 CMYA5Q8N3K9 4069 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 DPPA5A6NC42 116 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 OR9G9P0C7N8 305 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 ZNF735P0CB33 412 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 HLA-GP17693 338 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 RPL27AP46776 148 aaKnown RBP13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 PIGPP57054 158 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 ZNF585BQ52M93 769 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 SPANXN2Q5MJ10 180 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 SAMD5Q5TGI4 173 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 FAAP20Q6NZ36 180 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 CCDC190Q86UF4 302 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 CADM3Q8N126 398 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 OR4C16Q8NGL9 310 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 DUX3Q96PT4 197 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 PRRT1Q99946 306 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 THAP7Q9BT49 309 aaPredicted RBP13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 COA4Q9NYJ1 87 aa13.99□□□□□ -0.17
SEMA3B-201ENST00000416295 TGP01266 2768 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 G3V4G9 280 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 I3L521 148 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 UPK2O00526 184 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 APELAP0DMC3 54 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 SURF2Q15527 256 aaPredicted RBP13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 SLC25A42Q86VD7 318 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 Q8N402 240 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 CCDC71LQ8N9Z2 235 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 ADAD2Q8NCV1 583 aaKnown RBP13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 OR13C8Q8NGS7 320 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 OR5B12Q96R08 314 aa13.98□□□□□ -0.17
SEMA3B-201ENST00000416295 A0A0G2JLM5 398 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 KRASP01116 189 aa13.97□□□□□ -0.17
SEMA3B-201ENST00000416295 IL6RP08887 468 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms