RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 A8MWL6 223 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 FAM3BP58499 235 aaPredicted RBP13.23□□□□□ -0.29
PHRF1-203ENST00000416188 PEAR1Q5VY43 1037 aaPredicted RBP13.23□□□□□ -0.29
PHRF1-203ENST00000416188 ABLIM2Q6H8Q1 611 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 PIP4P1Q86T03 277 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 LOC389332A0A1B0GUA5 103 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 TNFRSF9Q07011 255 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 VKORC1L1Q8N0U8 176 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 AQP10Q96PS8 301 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 ID1P41134 155 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 ROS1P08922 2347 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 IGKV1D-43A0A0B4J1Z2 117 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 PTGDSP41222 190 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 CA7P43166 264 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 RAB24Q969Q5 203 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 TLNRD1Q9H1K6 362 aa13.23□□□□□ -0.29
PHRF1-203ENST00000416188 CGB1A6NKQ9 187 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 CELA3BP08861 270 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 PSMB2P49721 201 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 HERVK_113P61574 105 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 C1QL2Q7Z5L3 287 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 OR9G1Q8NH87 305 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 JMJD8Q96S16 334 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 AUP1Q9Y679 476 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 RNFT1Q5M7Z0 435 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
PHRF1-203ENST00000416188 H0YL77 283 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 TMEM78Q5T7P6 136 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 ZNF841Q6ZN19 808 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 PQLC2Q6ZP29 291 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.29
PHRF1-203ENST00000416188 IBA57Q5T440 356 aaKnown RBP13.22□□□□□ -0.29
PHRF1-203ENST00000416188 SP5Q6BEB4 398 aaPredicted RBP13.22□□□□□ -0.29
PHRF1-203ENST00000416188 ZNRF1Q8ND25 227 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 MDS2Q8NDY4 140 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 MYOZ3Q8TDC0 251 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
PHRF1-203ENST00000416188 ABCA1O95477 2261 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 IGHV3-48P01763 117 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
PHRF1-203ENST00000416188 ACAA1P09110 424 aaPredicted RBP13.21□□□□□ -0.29
PHRF1-203ENST00000416188 TCTAP57738 103 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 JPT1Q9UK76 154 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 WNT9BO14905 357 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 REG1AP05451 166 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 THBDP07204 575 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 NRN1LQ496H8 165 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 PRR30Q53SZ7 412 aaPredicted RBP13.21□□□□□ -0.29
PHRF1-203ENST00000416188 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 C16orf92Q96LL3 132 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 TCF19Q9Y242 345 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 TRGC2P03986 189 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 CD74P04233 296 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 DRAM1Q8N682 238 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 SH3BGRL3Q9H299 93 aa13.21□□□□□ -0.29
PHRF1-203ENST00000416188 TMEM189A5PLL7 270 aa13.21□□□□□ -0.3
PHRF1-203ENST00000416188 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.3
PHRF1-203ENST00000416188 FCGR2BP31994 310 aaPredicted RBP13.21□□□□□ -0.3
PHRF1-203ENST00000416188 FAM201AQ5SY85 155 aa13.21□□□□□ -0.3
PHRF1-203ENST00000416188 MYO7BQ6PIF6 2116 aa13.21□□□□□ -0.3
PHRF1-203ENST00000416188 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 TWIST1Q15672 202 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF837Q96EG3 531 aaPredicted RBP13.2□□□□□ -0.3
PHRF1-203ENST00000416188 HSPB7Q9UBY9 170 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 C5orf52A6NGY3 159 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 CRXO43186 299 aaPredicted RBP13.2□□□□□ -0.3
PHRF1-203ENST00000416188 RPL24P83731 157 aaKnown RBP13.2□□□□□ -0.3
PHRF1-203ENST00000416188 ASPHD2Q6ICH7 369 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF343Q6P1L6 599 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 DLX1P56177 255 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 TMEM187Q14656 261 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 OR5P3Q8WZ94 311 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 KIR2DL2P43627 348 aaPredicted RBP13.2□□□□□ -0.3
PHRF1-203ENST00000416188 RARRES2Q99969 163 aa13.2□□□□□ -0.3
PHRF1-203ENST00000416188 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 TBX15Q96SF7 602 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 ZNF729A6NN14 1252 aaPredicted RBP13.19□□□□□ -0.3
PHRF1-203ENST00000416188 H3BTX0 84 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 KBTBD11O94819 623 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 FHITP49789 147 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 PSG7Q13046 419 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 NHLRC3Q5JS37 347 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 TXNDC17Q9BRA2 123 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 QTRT1Q9BXR0 403 aaKnown RBP13.19□□□□□ -0.3
PHRF1-203ENST00000416188 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
PHRF1-203ENST00000416188 A0A0G2JNJ9 132 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 RND3P61587 244 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
PHRF1-203ENST00000416188 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 METTL26Q96S19 204 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 TP53RKQ96S44 253 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 Q9UFV3 132 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 IFITM10A6NMD0 228 aa13.19□□□□□ -0.3
PHRF1-203ENST00000416188 LYRM7Q5U5X0 104 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms