RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DPPA5A6NC42 116 aa13.39□□□□□ -0.27
PDLIM2-208ENST00000416159 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
PDLIM2-208ENST00000416159 CBX5P45973 191 aa13.39□□□□□ -0.27
PDLIM2-208ENST00000416159 BRWD1-AS2P59051 145 aa13.39□□□□□ -0.27
PDLIM2-208ENST00000416159 Q8N402 240 aa13.39□□□□□ -0.27
PDLIM2-208ENST00000416159 OR13F1Q8NGS4 319 aa13.39□□□□□ -0.27
PDLIM2-208ENST00000416159 NPIPB5A8MRT5 1133 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 TEX22C9J3V5 150 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 BMPR1BO00238 502 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 OR2J3O76001 311 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 PPYP01298 95 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 IL6RP08887 468 aaPredicted RBP13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 TIMM50Q3ZCQ8 353 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 CROCCP3Q8IVE0 287 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 OR2K2Q8NGT1 345 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 MUC7Q8TAX7 377 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 KCTD12Q96CX2 325 aaKnown RBP13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 FYTTD1Q96QD9 318 aaKnown RBP13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 SLC2A9Q9NRM0 540 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 STAB2Q8WWQ8 2551 aa13.38□□□□□ -0.27
PDLIM2-208ENST00000416159 NBEAL2Q6ZNJ1 2754 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 TNFSF12O43508 249 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 PTHLHP12272 177 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 MECP2P51608 486 aaKnown RBP13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 OR5AP2Q8NGF4 316 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 OR4A5Q8NH83 315 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 GIMAP1Q8WWP7 306 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 GPHA2Q96T91 129 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 SLC5A7Q9GZV3 580 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 BET1LQ9NYM9 111 aa13.37□□□□□ -0.27
PDLIM2-208ENST00000416159 E7EUB6 86 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 XRCC3O43542 346 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 DHFRP00374 187 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 CRYGCP07315 174 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 RPL8P62917 257 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 CATR1Q13166 79 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 SPAG16Q8N0X2 631 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 S100A16Q96FQ6 103 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 THAP7Q9BT49 309 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
PDLIM2-208ENST00000416159 HUWE1Q7Z6Z7 4374 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-208ENST00000416159 GGCTO75223 188 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-208ENST00000416159 HIST1H1BP16401 226 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-208ENST00000416159 PSMB6P28072 239 aa13.35□□□□□ -0.27
PDLIM2-208ENST00000416159 TUBA4BQ9H853 241 aa13.35□□□□□ -0.27
PDLIM2-208ENST00000416159 A0A1B0GW64 132 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 IZUMO1RA6ND01 250 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 HPRT1P00492 218 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 FCER2P06734 321 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 HLA-GP17693 338 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 TAS2R31P59538 309 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 FXYD4P59646 89 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 KLK9Q2XQG4 91 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 OR4A47Q6IF82 309 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 CD300LFQ8TDQ1 290 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 BORCS5Q969J3 196 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 FANCD2OSQ96PS1 177 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 HRASLSQ9HDD0 168 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 IFT46Q9NQC8 304 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 KLK9Q9UKQ9 250 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 DMRT1Q9Y5R6 373 aa13.34□□□□□ -0.27
PDLIM2-208ENST00000416159 MEIS3P1A6NDR6 274 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 PPP5D1E7EU14 171 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 SULT1C2O00338 296 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 AREGP15514 252 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 NQO2P16083 231 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 CTRB1P17538 263 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 RPS19P39019 145 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 POU2AF1Q16633 256 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 UBE2NLQ5JXB2 153 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 CASC10Q5T4H9 136 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 CTRB2Q6GPI1 263 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 ZNF818PQ6ZRF7 136 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 LAX1Q8IWV1 398 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 VCX3AQ9NNX9 186 aa13.33□□□□□ -0.28
PDLIM2-208ENST00000416159 A0A087WXM4 84 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 LGALS9O00182 355 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 NDUFB8O95169 186 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 OR2C1O95371 312 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 DEFA4P12838 97 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 TGFBR1P36897 503 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 HERV-K104P61576 105 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 CD300EQ496F6 205 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 DHRS11Q6UWP2 260 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 ADAMTSL5Q6ZMM2 481 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 C19orf35Q6ZS72 473 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 GPHB5Q86YW7 130 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 EEF1AKMT3Q96AZ1 226 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 YIPF6Q96EC8 236 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
PDLIM2-208ENST00000416159 PLEKHA2Q9HB19 425 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms