RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 LHX2P50458 406 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 CX3CL1P78423 397 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 FADS6Q8N9I5 356 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 ZNF502Q8TBZ5 544 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 JPT1Q9UK76 154 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 SPTA1P02549 2419 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 UQCRFS1P47985 274 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 DLX1P56177 255 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 OR4C12Q96R67 309 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 FBXL15Q9H469 300 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 DNAJC4Q9NNZ3 241 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 PINLYPA6NC86 204 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 H7C2G1 150 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 SMUG1Q53HV7 270 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 TUBA4BQ9H853 241 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 CADP27708 2225 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 NOTCH4Q99466 2003 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 B4DEV8 164 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 GPX1P07203 203 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 C10orf128Q5T292 105 aa9.02□□□□□ -0.97
COL12A1-203ENST00000416123 H1FOOQ8IZA3 346 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-203ENST00000416123 HOXA6P31267 233 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 CKS2P33552 79 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 FAM3BP58499 235 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 BPIFA4PQ86YQ2 179 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 LINC00470Q9BZP3 86 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 ZNF729A6NN14 1252 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 SEC11BP0C7V7 166 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 COX5BP10606 129 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 AMMECR1LQ6DCA0 310 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 IMMP1LQ96LU5 166 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 TRAF4Q9BUZ4 470 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 NUDT3O95989 172 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 TGFAP01135 160 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 BCL2P10415 239 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 ZNF708P17019 499 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 PSG7Q13046 419 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 WDR25Q64LD2 544 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 KLK15Q9H2R5 256 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 YAE1D1Q9NRH1 226 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 WDFY1Q8IWB7 410 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 NPIPB3Q92617 1050 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 NPIPB11E5RHQ5 1161 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 KLF7O75840 302 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 IL4P05112 153 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 RNASE1P07998 156 aaKnown RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 HSPE1P61604 102 aaKnown RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 RELQ04864 619 aaPredicted RBP9.01□□□□□ -0.97
COL12A1-203ENST00000416123 C1orf100Q5SVJ3 147 aa9.01□□□□□ -0.97
COL12A1-203ENST00000416123 LINC00305Q7Z4B0 112 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 TMEM186Q96B77 213 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 SULT1A2P50226 295 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 SERF2P84101 59 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 ZNF345Q14585 488 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 HERPUD1Q15011 391 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 OR51M1Q9H341 326 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 SRCAPQ6ZRS2 3230 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 TMEM177Q53S58 311 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 PCNX1Q96RV3 2341 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 STPG3Q8N7X2 389 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 TMEM45BQ96B21 275 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 ZNF324O75467 553 aaPredicted RBP9□□□□□ -0.97
COL12A1-203ENST00000416123 NPPCP23582 126 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 LSM10Q969L4 123 aaKnown RBP9□□□□□ -0.97
COL12A1-203ENST00000416123 FOXA2Q9Y261 457 aaPredicted RBP9□□□□□ -0.97
COL12A1-203ENST00000416123 FOXI3A8MTJ6 420 aaPredicted RBP9□□□□□ -0.97
COL12A1-203ENST00000416123 CRYBB3P26998 211 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
COL12A1-203ENST00000416123 UNQ9370/PRO34162Q6UXP9 181 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 LYRM2Q9NU23 88 aaPredicted RBP9□□□□□ -0.97
COL12A1-203ENST00000416123 TCF19Q9Y242 345 aa9□□□□□ -0.97
COL12A1-203ENST00000416123 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 DEPPQ9NTK1 212 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 SELENOKQ9Y6D0 94 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 ANOS1P23352 680 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 C11orf44Q8N8P7 122 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 MRPL14Q6P1L8 145 aaKnown RBP8.99□□□□□ -0.97
COL12A1-203ENST00000416123 HSD17B13Q7Z5P4 300 aaPredicted RBP8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FBLIM1Q8WUP2 373 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 SRSF12Q8WXF0 261 aaKnown RBP8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A10PA6NDY2 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A18PA6NE21 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A16PA6NEW6 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A20PA6NIJ5 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A8PA6NJQ4 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A7PA6NKC0 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A22PA8MWA6 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A12PA8MX19 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A5PA8MXJ8 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A23PA8MXZ1 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 J3QR89 54 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A15PP0C7V4 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A13PP0C7W8 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A14PP0C7W9 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 FAM90A24PP0C7X0 464 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 CD59P13987 128 aa8.99□□□□□ -0.97
COL12A1-203ENST00000416123 HIST1H1AQ02539 215 aaPredicted RBP8.99□□□□□ -0.97
COL12A1-203ENST00000416123 ZNF343Q6P1L6 599 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms