RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 ARL16Q0P5N6 197 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 POU2AF1Q16633 256 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 VWC2Q2TAL6 325 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 CT45A1Q5HYN5 189 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM201AQ5SY85 155 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 C22orf34Q6ZV56 151 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 HAPLN4Q86UW8 402 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 CT45A3Q8NHU0 189 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 DDB2Q92466 427 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 ACTR3CQ9C0K3 210 aaPredicted RBP11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 CISD1Q9NZ45 108 aaKnown RBP11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 MLXQ9UH92 298 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 C9JQL5 133 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 APOA2P02652 100 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 ZNF134P52741 427 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 ACOT6Q3I5F7 207 aaPredicted RBP11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 RPL39P5Q59GN2 51 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 ADAM5Q6NVV9 412 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM216BQ8N7L0 139 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 ZNF439Q8NDP4 499 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 CLDND2Q8NHS1 167 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 PLPPR2Q96GM1 343 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 RSG1Q9BU20 258 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 RPRMQ9NS64 109 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 KAAG1Q9UBP8 84 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 PRELID1Q9Y255 219 aa11.11□□□□□ -0.63
SSR4P1-201ENST00000415143 SAA2-SAA4A0A096LPE2 208 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 A0A1B0GV50 99 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 B4DEV8 164 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 SHISA9B4DS77 424 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 FSTL3O95633 263 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 SNRNP70P08621 437 aaKnown RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 SRP19P09132 144 aaKnown RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 OR9G9P0C7N8 305 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 SAA2P0DJI9 122 aaPredicted RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 OR13C7P0DN81 318 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 IL3RAP26951 378 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 HOXA1P49639 335 aaPredicted RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 HSPE1P61604 102 aaKnown RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 DLK1P80370 383 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 RELBQ01201 579 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 RAB31Q13636 194 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 HAGHQ16775 308 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 AVPI1Q5T686 147 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM53AQ6NSI3 398 aaPredicted RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 CCL17Q92583 94 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 LHX4Q969G2 390 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 VAX2Q9UIW0 290 aa11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
SSR4P1-201ENST00000415143 CHD3Q12873 2000 aaKnown RBP11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 TRBV23-1A0A0A0MS06 115 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 C7orf77A4D0Y5 90 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 C15orf61A6NNL5 157 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 PMS2P5A8MQ11 134 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 E7EQL1 145 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 PROP1O75360 226 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 F12P00748 615 aaPredicted RBP11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 BCL2P10415 239 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 CD1BP29016 333 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 CCL20P78556 96 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 ICAM4Q14773 271 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 HFEQ30201 348 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 PRR30Q53SZ7 412 aaPredicted RBP11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 SSX9Q7RTT3 188 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 LINC00311Q8N616 119 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 RXFP4Q8TDU9 374 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 RHOVQ96L33 236 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 MAP1LC3BQ9GZQ8 125 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 MANBALQ9NQG1 85 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
SSR4P1-201ENST00000415143 IGHV1-69-2A0A0G2JMI3 117 aa11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 MEX3AA1L020 520 aaKnown RBP11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 CCL21O00585 134 aa11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 SLC31A2O15432 143 aa11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 MT-ND4LP03901 98 aa11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 ARG1P05089 322 aa11.08□□□□□ -0.64
SSR4P1-201ENST00000415143 SELLP14151 372 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms