RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 MRGPRG-AS1Q2M3A8 158 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 DEFB112Q30KQ8 113 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 FOXRED2Q8IWF2 684 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 SPIN2AQ99865 258 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 SPIN2BQ9BPZ2 258 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 MEGF9Q9H1U4 602 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 PIGBOS1A0A0B4J2F0 54 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 H0YIZ8 118 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 KBTBD11O94819 623 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 SLC25A6P12236 298 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 S100A10P60903 97 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 PJVKQ0ZLH3 352 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 EBI3Q14213 229 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 PSG5Q15238 335 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 MMDQ15546 238 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 OR11H4Q8NGC9 324 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 OR1S1Q8NH92 325 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 SSX3Q99909 188 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 QTRT1Q9BXR0 403 aaKnown RBP7.74□□□□□ -1.17
RIF1-202ENST00000414861 MAGT1Q9H0U3 335 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 BET1LQ9NYM9 111 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 RCL1Q9Y2P8 373 aaKnown RBP7.74□□□□□ -1.17
RIF1-202ENST00000414861 NSD1Q96L73 2696 aaPredicted RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 MPC2O95563 127 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 LY6G6DO95868 133 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 CRYGBP07316 175 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 BRS3P32247 399 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 LGALS7P47929 136 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 ARHGDIBP52566 201 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 UBE2KP61086 200 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 C9orf139Q6ZV77 190 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 TMEM219Q86XT9 240 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 OR2T10Q8NGZ9 312 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 ZNF48Q96MX3 618 aaPredicted RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 FBXL15Q9H469 300 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 PLSCR3Q9NRY6 295 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 COA4Q9NYJ1 87 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 C15orf61A6NNL5 157 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 K7EPK0 472 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 UPK2O00526 184 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 ST8SIA3O43173 380 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 RBMXL2O75526 392 aaKnown RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 TMEM11P17152 192 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 NKX2-5P52952 324 aaPredicted RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 BPIFB3P59826 476 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 POLR2GP62487 172 aaKnown RBP eCLIP7.73□□□□□ -1.17
RIF1-202ENST00000414861 CYCSP99999 105 aaKnown RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 LRRC75BQ2VPJ9 315 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 SPINK9Q5DT21 86 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 FAM71E2Q8N5Q1 922 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 ASB13Q8WXK3 278 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 ZNF430Q9H8G1 570 aaPredicted RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 OR5AC2Q9NZP5 309 aa7.73□□□□□ -1.17
RIF1-202ENST00000414861 LSM5Q9Y4Y9 91 aaKnown RBP7.73□□□□□ -1.17
RIF1-202ENST00000414861 H3BUX3 64 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 NBR2O15453 112 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 FAM106CPP0CH98 169 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 PSMB6P28072 239 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 NKX2-1P43699 371 aaPredicted RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 DYNLT3P51808 116 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 ID3Q02535 119 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 VMA21Q3ZAQ7 101 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 AARDQ4LEZ3 155 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 C10orf55Q5SWW7 151 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 NPBQ8NG41 125 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 OR4A16Q8NH70 328 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 GRPEL2Q8TAA5 225 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 TMEM167AQ8TBQ9 72 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 TSNAXQ99598 290 aaKnown RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 TMEM14BQ9NUH8 114 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 MBD2Q9UBB5 411 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 METTL1Q9UBP6 276 aaKnown RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 SIGLEC9Q9Y336 463 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 FN1P02751 2386 aaKnown RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 RRHO14718 337 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 KCNAB3O43448 404 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 SSSCA1O60232 199 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 NDUFA3O95167 84 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 C1QBP02746 253 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 OPN1MWP04001 364 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 SSBP2P81877 361 aaPredicted RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 ZFP69Q49AA0 526 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 THNSL2Q86YJ6 484 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 ZDHHC16Q969W1 377 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 CLCC1Q96S66 551 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 RNF5Q99942 180 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 HSPB7Q9UBY9 170 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 FOXA2Q9Y261 457 aaPredicted RBP7.72□□□□□ -1.17
RIF1-202ENST00000414861 POMT1Q9Y6A1 747 aa7.72□□□□□ -1.17
RIF1-202ENST00000414861 E7EUB6 86 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 FCN1O00602 326 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 SNAPC5O75971 98 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 SPDEFO95238 335 aa7.71□□□□□ -1.18
RIF1-202ENST00000414861 TMEM50AO95807 157 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms