RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DPH3Q96FX2 82 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 DUSP21Q9H596 190 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 CLCF1Q9UBD9 225 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 NOP16Q9Y3C1 178 aaKnown RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TPRKBQ9Y3C4 175 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 PYGO1Q9Y3Y4 419 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 NEUROG3Q9Y4Z2 214 aa2.89□□□□□ -1.95
SF3B1-203ENST00000414174 COL3A1P02461 1466 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 XIRP1Q702N8 1843 aaKnown RBP2.89□□□□□ -1.95
SF3B1-203ENST00000414174 TOPBP1Q92547 1522 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 CDC42BPAQ5VT25 1732 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 A0A1B0GUL6 1792 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 ODAMA1E959 279 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 PLAC8L1A1L4L8 177 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 IZUMO1RA6ND01 250 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 EPM2AB3EWF7 344 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 MCRIP1C9JLW8 97 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 H7C1H1 209 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 ISLRO14498 428 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SLC37A4O43826 429 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 YPEL1O60688 119 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 PDCD6O75340 191 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SIX6O95475 246 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 HRASP01112 189 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 IGLC2P0DOY2 106 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 IGLC3P0DOY3 106 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 HOXB6P17509 224 aaKnown RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SRP14P37108 136 aaKnown RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 MYCNOSP40205 109 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 NMUP48645 174 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A1P53007 311 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 PROK1P58294 105 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 B3GALT5-AS1P59052 145 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM258P61165 79 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 DAD1P61803 113 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 HERVK_113P63121 156 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 DIAPH2-AS1Q14236 149 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 DUSP5Q16690 384 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 UBE2SQ16763 222 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 ECSCRQ19T08 205 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 RRN3P1Q2M238 152 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 FAM153CQ494X1 144 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 RNASE12Q5GAN4 147 aaKnown RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 GFI1BQ5VTD9 330 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SCGB1D4Q6XE38 83 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SSX8Q7RTT4 187 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 PRR15Q8IV56 129 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SAXO1Q8IYX7 474 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 LINC00471Q8N535 108 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 NPWQ8N729 165 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 DCAF4L2Q8NA75 395 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 OR5D16Q8NGK9 328 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 OR10J6PQ8NGY7 276 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 ATP6V0E2Q8NHE4 81 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 DDB2Q92466 427 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 FGF11Q92914 225 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM230Q96A57 120 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 DNAJA3Q96EY1 480 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A44Q96H78 314 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 YPEL2Q96QA6 119 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A21Q9BQT8 299 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 OVOL2Q9BRP0 275 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 MRPL20Q9BYC9 149 aaKnown RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM9BQ9NQ34 198 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM106BQ9NUM4 274 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 MTFP1Q9UDX5 166 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 CACFD1Q9UGQ2 172 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF256Q9Y2P7 627 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-203ENST00000414174 PAM16Q9Y3D7 125 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 HEBP2Q9Y5Z4 205 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 MROH1Q8NDA8 1641 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 ADAMTSL3P82987 1691 aa2.88□□□□□ -1.95
SF3B1-203ENST00000414174 HECW2Q9P2P5 1572 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PTPRKQ15262 1439 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ABCA5Q8WWZ7 1642 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 A0A087WWC5 75 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 A0A087WZ39 114 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 FAM236AA0A1B0GUQ0 79 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 FAM236BA0A1B0GV22 79 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 C7orf77A4D0Y5 90 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ARRDC5A6NEK1 342 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 OR2T8A6NH00 312 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 F6UB75 175 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 F8W1H4 67 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 UQCRQO14949 82 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 NAPSAO96009 420 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PTHP01270 115 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 IGLV2-14P01704 120 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 TRGC1P0CF51 173 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 NFYAP23511 347 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RBMXP38159 391 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 CDKN2AP42771 156 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 CA7P43166 264 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 KLK7P49862 253 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms