RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 AADACL3Q5VUY0 350 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 ADAD2Q8NCV1 583 aaKnown RBP11.43□□□□□ -0.58
LIMS4-201ENST00000413601 TMEM167AQ8TBQ9 72 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 DLX4Q92988 240 aaPredicted RBP11.43□□□□□ -0.58
LIMS4-201ENST00000413601 BORCS5Q969J3 196 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 TINAGL1Q9GZM7 467 aaPredicted RBP11.43□□□□□ -0.58
LIMS4-201ENST00000413601 FXYD6Q9H0Q3 95 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 SCOCQ9UIL1 159 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 ADAM30Q9UKF2 790 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 ANKRD34BA5PLL1 514 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 RGS5O15539 181 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 RBMXL2O75526 392 aaKnown RBP11.42□□□□□ -0.58
LIMS4-201ENST00000413601 BRI3O95415 125 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 PRH1P02810 166 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 TSPAN5P62079 268 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 DGCR2P98153 550 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 DEFB121Q5J5C9 76 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 RAB2BQ8WUD1 216 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 SPIN2AQ99865 258 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 SPIN2BQ9BPZ2 258 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
LIMS4-201ENST00000413601 HMX3A6NHT5 357 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 E7EUB6 86 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 CTDSP2O14595 271 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
LIMS4-201ENST00000413601 HPRT1P00492 218 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 RLN1P04808 185 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
LIMS4-201ENST00000413601 MYOD1P15172 320 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 MAS1LP35410 378 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 RPL27AP46776 148 aaKnown RBP11.41□□□□□ -0.58
LIMS4-201ENST00000413601 RPL5P46777 297 aaKnown RBP11.41□□□□□ -0.58
LIMS4-201ENST00000413601 TMBIM6P55061 237 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 TAS2R31P59538 309 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 LAX1Q8IWV1 398 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 OR52I2Q8NH67 350 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 FYTTD1Q96QD9 318 aaKnown RBP11.41□□□□□ -0.58
LIMS4-201ENST00000413601 ABHD1Q96SE0 405 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 AIFM2Q9BRQ8 373 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 HRASLSQ9HDD0 168 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 KLK11Q9UBX7 282 aa11.41□□□□□ -0.58
LIMS4-201ENST00000413601 A0A1B0GW64 132 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 M0QYG6 137 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 GPR31O00270 319 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 S1PR2O95136 353 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 NQO2P16083 231 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 ECI1P42126 302 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 RPL8P62917 257 aaKnown RBP11.4□□□□□ -0.58
LIMS4-201ENST00000413601 ZNF45Q02386 682 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 CMTM1Q8IZ96 169 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 DYNC2LI1Q8TCX1 351 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 CD300LFQ8TDQ1 290 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 PLEKHA2Q9HB19 425 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 RANGRFQ9HD47 186 aaPredicted RBP11.4□□□□□ -0.58
LIMS4-201ENST00000413601 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
LIMS4-201ENST00000413601 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
LIMS4-201ENST00000413601 TRAV3A0A0B4J244 114 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 ZNF735P0CB33 412 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 RPA2P15927 270 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 HLA-GP17693 338 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 F2RP25116 425 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 RHOGP84095 191 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 ZNF343Q6P1L6 599 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 DMBX1Q8NFW5 382 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 OR4A5Q8NH83 315 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 FCAMRQ8WWV6 532 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 DGCR14Q96DF8 476 aaKnown RBP11.39□□□□□ -0.59
LIMS4-201ENST00000413601 PRR25Q96S07 402 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 BCL7BQ9BQE9 202 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 AKIP1Q9NQ31 210 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 MTFP1Q9UDX5 166 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 DNAH3Q8TD57 4116 aa11.39□□□□□ -0.59
LIMS4-201ENST00000413601 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 DPPA5A6NC42 116 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 H3BMQ9 156 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 UPK2O00526 184 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 SAP30O75446 220 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 TPPPO94811 219 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 CD3DP04234 171 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 LPAR6P43657 344 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 INSL3P51460 131 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 VAX1Q5SQQ9 334 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 LPCAT3Q6P1A2 487 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 C19orf35Q6ZS72 473 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 ZNF429Q86V71 674 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 SLC25A42Q86VD7 318 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 C15orf40Q8WUR7 153 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 RSRP1Q9BUV0 290 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 SLC2A9Q9NRM0 540 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 TMEM140Q9NV12 185 aa11.38□□□□□ -0.59
LIMS4-201ENST00000413601 CCDC59Q9P031 241 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms