RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MFFQ9GZY8 342 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 C7orf69Q9H7B7 122 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.35□□□□□ -1.55
VPS41-204ENST00000413141 TMEM14BQ9NUH8 114 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 BET1LQ9NYM9 111 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 FOXA2Q9Y261 457 aaPredicted RBP5.35□□□□□ -1.55
VPS41-204ENST00000413141 NSG2Q9Y328 171 aa5.35□□□□□ -1.55
VPS41-204ENST00000413141 FASNP49327 2511 aaKnown RBP5.35□□□□□ -1.55
VPS41-204ENST00000413141 PRRC2AP48634 2157 aaKnown RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 IGHV3OR16-10A0A075B7F0 116 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 UPK2O00526 184 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 SYNGR2O43760 224 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 RBMXL2O75526 392 aaKnown RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 OR2F2O95006 317 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 SPDEFO95238 335 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 TMEM50AO95807 157 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 TGFAP01135 160 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 AVPP01185 164 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 IGKV1D-33P01593 117 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 IGKV1-33P01594 117 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 IGHV4-38-2P0DP08 117 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 HKR1P10072 659 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 PVALBP20472 110 aaPredicted RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 PAX6P26367 422 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 RPL12P30050 165 aaKnown RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 S100A11P31949 105 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 P2RY1P47900 373 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 LGALS7P47929 136 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 AP2S1P53680 142 aaPredicted RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 UBE2KP61086 200 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 RPS16P62249 146 aaKnown RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 VAMP2P63027 116 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 OR2F1Q13607 317 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 VMA21Q3ZAQ7 101 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 PDLIM3Q53GG5 364 aaPredicted RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 FBLN7Q53RD9 439 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 KLF17Q5JT82 389 aaPredicted RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 GPR157Q5UAW9 335 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 BRD3OSQ6XYD6 125 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 ACOT7LQ6ZUV0 252 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 TMUB2Q71RG4 321 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 KCNRGQ8N5I3 272 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 OR52E5Q8NH55 327 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 OR4A5Q8NH83 315 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 VSTM2AQ8TAG5 236 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 TMEM167AQ8TBQ9 72 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 MALSU1Q96EH3 234 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 RITA1Q96K30 269 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 RAB40CQ96S21 281 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 ARL6Q9H0F7 186 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 RBKSQ9H477 322 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 TPSG1Q9NRR2 321 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 LYRM2Q9NU23 88 aaPredicted RBP5.34□□□□□ -1.55
VPS41-204ENST00000413141 PRNDQ9UKY0 176 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 WSB1Q9Y6I7 421 aa5.34□□□□□ -1.55
VPS41-204ENST00000413141 SVEP1Q4LDE5 3571 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 CREBBPQ92793 2442 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS41-204ENST00000413141 A0A0D9SG52 128 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 IGSF23A1L1A6 192 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 H3BP45 60 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 BCL2L11O43521 198 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 SLC25A17O43808 307 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 CHST1O43916 411 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 GPR137BO60478 399 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 TSC22D2O75157 780 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 MED6O75586 246 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 MOSP00540 346 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 IFNA17P01571 189 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 CRYGBP07316 175 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 SNRNP70P08621 437 aaKnown RBP5.33□□□□□ -1.56
VPS41-204ENST00000413141 FGF2P09038 288 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 IAPPP10997 89 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 C4BPBP20851 252 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 CNTFRP26992 372 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 NUP62P37198 522 aaPredicted RBP5.33□□□□□ -1.56
VPS41-204ENST00000413141 CAV2P51636 162 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 PAX9P55771 341 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 TAS2R30P59541 319 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 SPCS3P61009 180 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 RPL8P62917 257 aaKnown RBP5.33□□□□□ -1.56
VPS41-204ENST00000413141 EWSR1Q01844 656 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS41-204ENST00000413141 OPCMLQ14982 345 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 PSG5Q15238 335 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 MRGPRG-AS1Q2M3A8 158 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 SPINK9Q5DT21 86 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 THNSL2Q86YJ6 484 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 CIARTQ8N365 385 aaPredicted RBP5.33□□□□□ -1.56
VPS41-204ENST00000413141 OR2C3Q8N628 320 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 Q8N6K4 173 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 DTD1Q8TEA8 209 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 TSNAXQ99598 290 aaKnown RBP5.33□□□□□ -1.56
VPS41-204ENST00000413141 RNF5Q99942 180 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 CACFD1Q9UGQ2 172 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 NUP50Q9UKX7 468 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 TCF19Q9Y242 345 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 ZNF257Q9Y2Q1 563 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 OR51B2Q9Y5P1 312 aa5.33□□□□□ -1.56
VPS41-204ENST00000413141 ITPR3Q14573 2671 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms