RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 EBI3Q14213 229 aa13.47□□□□□ -0.25
SSB-202ENST00000409333 DEFB112Q30KQ8 113 aa13.47□□□□□ -0.25
SSB-202ENST00000409333 Q8N6K4 173 aa13.47□□□□□ -0.25
SSB-202ENST00000409333 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
SSB-202ENST00000409333 COA4Q9NYJ1 87 aa13.47□□□□□ -0.25
SSB-202ENST00000409333 BET1LQ9NYM9 111 aa13.47□□□□□ -0.25
SSB-202ENST00000409333 HIVEP1P15822 2718 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 TMEM11P17152 192 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 UBE2KP61086 200 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 PSG5Q15238 335 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 MMDQ15546 238 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 CXorf66Q5JRM2 361 aaPredicted RBP13.46□□□□□ -0.25
SSB-202ENST00000409333 C9orf139Q6ZV77 190 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 FOXRED2Q8IWF2 684 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 TSNAXQ99598 290 aaKnown RBP13.46□□□□□ -0.25
SSB-202ENST00000409333 SSX3Q99909 188 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 RNF5Q99942 180 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 TMUB1Q9BVT8 246 aa13.46□□□□□ -0.25
SSB-202ENST00000409333 BOLA2-SMG1P6H3BVE0 249 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 UPK2O00526 184 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 RBMXL2O75526 392 aaKnown RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 LY6G6DO95868 133 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 MBPP02686 304 aaPredicted RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 FAM106CPP0CH98 169 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 DYNLT3P51808 116 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 S100A10P60903 97 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 LRRC75BQ2VPJ9 315 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 VMA21Q3ZAQ7 101 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 THNSL2Q86YJ6 484 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 OR4A16Q8NH70 328 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 PIFOQ8TCI5 191 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 QTRT1Q9BXR0 403 aaKnown RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 C15orf61A6NNL5 157 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 NBR2O15453 112 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 MPC2O95563 127 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 CRYGBP07316 175 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 MYOD1P15172 320 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 VSTM2AQ8TAG5 236 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 MAGT1Q9H0U3 335 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 FBXL15Q9H469 300 aa13.45□□□□□ -0.26
SSB-202ENST00000409333 METTL1Q9UBP6 276 aaKnown RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 LSM5Q9Y4Y9 91 aaKnown RBP13.45□□□□□ -0.26
SSB-202ENST00000409333 CUBNO60494 3623 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 K7EPK0 472 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 ST8SIA3O43173 380 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 CD99P14209 185 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 PSMB6P28072 239 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 MRGPRG-AS1Q2M3A8 158 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 NPBQ8NG41 125 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 OR11H4Q8NGC9 324 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 TMEM167AQ8TBQ9 72 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 ZNF48Q96MX3 618 aaPredicted RBP13.44□□□□□ -0.26
SSB-202ENST00000409333 ZNF430Q9H8G1 570 aaPredicted RBP13.44□□□□□ -0.26
SSB-202ENST00000409333 PLSCR3Q9NRY6 295 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
SSB-202ENST00000409333 SIGLEC9Q9Y336 463 aa13.44□□□□□ -0.26
SSB-202ENST00000409333 H0YIZ8 118 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 H3BUX3 64 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 RRHO14718 337 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 SNAPC5O75971 98 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 NDUFA3O95167 84 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 SPDEFO95238 335 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 C1QBP02746 253 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 ID3Q02535 119 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 PJVKQ0ZLH3 352 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 TEX29Q8N6K0 151 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 TEX45Q8NA69 505 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 TMEM14BQ9NUH8 114 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 POMT1Q9Y6A1 747 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 POLR2GP62487 172 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSB-202ENST00000409333 TNFRSF9Q07011 255 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 LY6EQ16553 131 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 ZFP69Q49AA0 526 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 AARDQ4LEZ3 155 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 SPINK9Q5DT21 86 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 ZNF429Q86V71 674 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 TMEM219Q86XT9 240 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 OR4A5Q8NH83 315 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 CLCC1Q96S66 551 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 OR5AC2Q9NZP5 309 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 KIAA1456Q9P272 454 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 HSPB7Q9UBY9 170 aa13.43□□□□□ -0.26
SSB-202ENST00000409333 FOXA2Q9Y261 457 aaPredicted RBP13.43□□□□□ -0.26
SSB-202ENST00000409333 NCBP2LA6PVI3 153 aaKnown RBP13.42□□□□□ -0.26
SSB-202ENST00000409333 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.263e-6■■■■□ 19.9
SSB-202ENST00000409333 SRP14P37108 136 aaKnown RBP13.42□□□□□ -0.26
SSB-202ENST00000409333 RPL8P62917 257 aaKnown RBP13.42□□□□□ -0.26
SSB-202ENST00000409333 PLGLAQ15195 96 aa13.42□□□□□ -0.26
SSB-202ENST00000409333 C11orf87Q6NUJ2 197 aa13.42□□□□□ -0.26
SSB-202ENST00000409333 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
SSB-202ENST00000409333 RNF126Q9BV68 326 aa13.42□□□□□ -0.26
SSB-202ENST00000409333 PRNDQ9UKY0 176 aa13.42□□□□□ -0.26
SSB-202ENST00000409333 HIVEP2P31629 2446 aa13.41□□□□□ -0.26
SSB-202ENST00000409333 SSSCA1O60232 199 aa13.41□□□□□ -0.26
SSB-202ENST00000409333 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms