RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 FAM173AQ9BQD7 235 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 HEYLQ9NQ87 328 aaPredicted RBP10.9□□□□□ -0.66
PTPRN-202ENST00000409251 IGLV3-32A0A0A0MS00 114 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 IGKV1-5P01602 117 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 SRIP30626 198 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 KRTCAP3Q53RY4 240 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF766Q5HY98 468 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 TGIF2LYQ8IUE0 185 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 ZPBPQ9BS86 351 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 OR2D2Q9H210 308 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 ZFP30Q9Y2G7 519 aa10.9□□□□□ -0.67
PTPRN-202ENST00000409251 H0Y980 276 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 ARL14EPLP0DKL9 152 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
PTPRN-202ENST00000409251 EXPH5Q8NEV8 1989 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 GJE1A6NN92 205 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 RHBDL1O75783 438 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 OCC1Q8TAD7 63 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
PTPRN-202ENST00000409251 WASHC3Q9Y3C0 194 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 CLDN14O95500 239 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 SP1P08047 785 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 FER1L6-AS2Q96M78 137 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 PIEZO1Q92508 2521 aa10.89□□□□□ -0.67
PTPRN-202ENST00000409251 MAP1AP78559 2803 aaPredicted RBP10.89□□□□□ -0.67
PTPRN-202ENST00000409251 TNRC6BQ9UPQ9 1833 aaKnown RBP10.88□□□□□ -0.67
PTPRN-202ENST00000409251 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 KLK10O43240 276 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 CD46P15529 392 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 EDDM3AQ14507 147 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 H2BFWTQ7Z2G1 175 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 ARL6IP6Q8N6S5 226 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 NINJ1Q92982 152 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
PTPRN-202ENST00000409251 WNT5BQ9H1J7 359 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 GPR35Q9HC97 309 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 SH2D2AQ9NP31 389 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 NRN1Q9NPD7 142 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 A8MXE2 369 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 HSBP1O75506 76 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 LYZL6O75951 148 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 LINC00614P0C842 121 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 PMCHL1Q16048 86 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 ATP6V1FQ16864 119 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 TPTE2P1Q5T6R2 138 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 MBD3L1Q8WWY6 194 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 ABHD14BQ96IU4 210 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 LOXL4Q96JB6 756 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF716A6NP11 495 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 IL6RP08887 468 aaPredicted RBP10.88□□□□□ -0.67
PTPRN-202ENST00000409251 RAC2P15153 192 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 SSC4DQ8WTU2 575 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 GNB4Q9HAV0 340 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 DECR2Q9NUI1 292 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 FZR1Q9UM11 496 aa10.88□□□□□ -0.67
PTPRN-202ENST00000409251 KALRNO60229 2985 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 ODAMA1E959 279 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 VAMP5O95183 116 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 OR10J4P0C629 311 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 SRP14P37108 136 aaKnown RBP10.87□□□□□ -0.67
PTPRN-202ENST00000409251 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
PTPRN-202ENST00000409251 RANP62826 216 aaKnown RBP10.87□□□□□ -0.67
PTPRN-202ENST00000409251 TCF15Q12870 199 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 TRIB1Q96RU8 372 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 LRFN3Q9BTN0 628 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 PLEKHA3Q9HB20 300 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF503-AS2A6NEH8 195 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 GABRA2P47869 451 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 MED12LQ86YW9 2145 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF295-AS1Q8N0V1 137 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 STPG3Q8N7X2 389 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF738Q8NE65 137 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 PXMP4Q9Y6I8 212 aa10.87□□□□□ -0.67
PTPRN-202ENST00000409251 C21orf140B9A014 251 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 S1PR2O95136 353 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 RPL31P62899 125 aaKnown RBP10.86□□□□□ -0.67
PTPRN-202ENST00000409251 SLC24A4Q8NFF2 622 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 HIPK2Q9H2X6 1198 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 ELOVL5Q9NYP7 299 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 KLRC4-KLRK1H3BQV0 150 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 OR7C2O60412 319 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 NXPH2O95156 264 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 FOXC1Q12948 553 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 ABLIM2Q6H8Q1 611 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 OR4A47Q6IF82 309 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms