RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	TRGC2	P03986	189 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	ARL14EPL	P0DKL9	152 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	CEACAM1	P13688	526 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	NUBP1	P53384	320 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	NR2C2AP	Q86WQ0	139 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	RTN4R	Q9BZR6	473 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	TMEM106B	Q9NUM4	274 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	PI4KA	P42356	2102 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	IGHV1-2	P23083	117 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	DNM1P46	Q6ZS02	220 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	GALNT14	Q96FL9	552 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	PSMG3	Q9BT73	122 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	FCGR2B	P31994	310 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	C16orf92	Q96LL3	132 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	C9orf172	C9J069	976 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	FHIT	P49789	147 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	STPG3	Q8N7X2	389 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	OR10J6P	Q8NGY7	276 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	MYOZ3	Q8TDC0	251 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	OR51M1	Q9H341	326 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	NPIPB7	O75200	414 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	REG1A	P05451	166 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	PSG7	Q13046	419 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	FAM57A	Q8TBR7	257 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	NABP2	Q9BQ15	211 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	C19orf24	Q9BVV8	132 aa		11.28	□□□□□ -0.6
CACNA1C-222	ENST00000406454	KIR2DL2	P43627	348 aa	Predicted RBP	11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	ATP5I	P56385	69 aa	Predicted RBP	11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	ZFP36L1	Q07352	338 aa	Known RBP	11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	VN1R17P	Q8TDU5	208 aa		11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	PLSCR2	Q9NRY7	297 aa		11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	TFPI2	P48307	235 aa		11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	AUP1	Q9Y679	476 aa		11.27	□□□□□ -0.6
CACNA1C-222	ENST00000406454	OR13A1	Q8NGR1	328 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	SPSB4	Q96A44	273 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	UCP1	P25874	307 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	LHX2	P50458	406 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	DLX1	P56177	255 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	OR51G1	Q8NGK1	321 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	NPIPB3	Q92617	1050 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	NACA	E9PAV3	2078 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	EBLN2	Q6P2I7	272 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	MSGN1	A6NI15	193 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CA2	P00918	260 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	TWIST1	Q15672	202 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CDC42EP3	Q9UKI2	254 aa		11.27	□□□□□ -0.61
CACNA1C-222	ENST00000406454	DIRC3	C9JPN6	131 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	C1QTNF12	Q5T7M4	302 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	MRPL32	Q9BYC8	188 aa	Known RBP	11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	NPIPB11	E5RHQ5	1161 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PDLIM4	P50479	330 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CFHR1	Q03591	330 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	C2orf68	Q2NKX9	166 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	FAM201A	Q5SY85	155 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	AMMECR1L	Q6DCA0	310 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	FAM216B	Q8N7L0	139 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	C9orf106	Q8NAJ2	232 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	TMEM56-RWDD3	S4R434	201 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CRYBB3	P26998	211 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	ATP5J2	P56134	94 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	FXYD3	Q14802	87 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	ABHD17A	Q96GS6	310 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	GPR61	Q9BZJ8	451 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	DEPP	Q9NTK1	212 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	IQCF6	A8MYZ5	107 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PRR32	B1ATL7	298 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	HLA-DQA1	P01909	254 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PKIA	P61925	76 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	TBX15	Q96SF7	602 aa		11.26	□□□□□ -0.61
CACNA1C-222	ENST00000406454	ACAA1	P09110	424 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PSG9	Q00887	426 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	SDK2	Q58EX2	2172 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PQLC2L	A1A4F0	135 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	MAS1L	P35410	378 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	OSR1	Q8TAX0	266 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	FBLN5	Q9UBX5	448 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	AKAP6	Q13023	2319 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	IFITM10	A6NMD0	228 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	GATAD1	Q8WUU5	269 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	TM4SF20	Q53R12	229 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CHODL	Q9H9P2	273 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PAM16	Q9Y3D7	125 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PROB1	E7EW31	1015 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	GCHFR	P30047	84 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	SAPCD1	Q5SSQ6	148 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	LOC389332	A0A1B0GUA5	103 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	ZNF98	A6NK75	572 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	C17orf98	A8MV24	154 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454		J3QRE1	110 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	TM4SF5	O14894	197 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	WBP1	Q96G27	269 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	PARL	Q9H300	379 aa		11.25	□□□□□ -0.61
CACNA1C-222	ENST00000406454	LTBP1	Q14766	1721 aa		11.24	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CXorf65	A6NEN9	183 aa		11.24	□□□□□ -0.61
CACNA1C-222	ENST00000406454	CELA3B	P08861	270 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms