RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 IGHV3-7P01780 117 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 BMP5P22003 454 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 CATR1Q13166 79 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 SMIM21Q3B7S5 101 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 LINC01551Q86U37 167 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 ZNRF1Q8ND25 227 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 OR10A7Q8NGE5 316 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 RAB1CQ92928 201 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 DUSP13Q9UII6 198 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 RBFOX2O43251 390 aaKnown RBP eCLIP8.11□□□□□ -1.11
MSH2-202ENST00000406134 YPEL1O60688 119 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 GYPAP02724 150 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 AMBPP02760 352 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 NKX6-1P78426 367 aaPredicted RBP8.11□□□□□ -1.11
MSH2-202ENST00000406134 GAMTQ14353 236 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 LTC4SQ16873 150 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 TGIF2LXQ8IUE1 241 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 YPEL2Q96QA6 119 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 GGTLC1Q9BX51 225 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 NBASA2RRP1 2371 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 CADP27708 2225 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 TMPRSS2O15393 492 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 CEACAM4O75871 244 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 TYMSP04818 313 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 IL6RP08887 468 aaPredicted RBP8.11□□□□□ -1.11
MSH2-202ENST00000406134 FABP4P15090 132 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 GNG10P50151 68 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 RPL15P61313 204 aaKnown RBP8.11□□□□□ -1.11
MSH2-202ENST00000406134 EDDM3AQ14507 147 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 ARSJQ5FYB0 599 aaPredicted RBP8.11□□□□□ -1.11
MSH2-202ENST00000406134 ZNF474Q6S9Z5 364 aaPredicted RBP8.11□□□□□ -1.11
MSH2-202ENST00000406134 FAM180AQ6UWF9 173 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 TGIF2LYQ8IUE0 185 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 OR4F5Q8NH21 305 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 LEAP2Q969E1 77 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 C14orf144Q96I85 54 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 OR4F4Q96R69 305 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 PCGF1Q9BSM1 259 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 MS4A5Q9H3V2 200 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 WASF3Q9UPY6 502 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 FAM215AQ9Y5M1 114 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 LRBAP50851 2863 aa8.11□□□□□ -1.11
MSH2-202ENST00000406134 CRYAAP02489 173 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 ADH4P08319 380 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 MYOD1P15172 320 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 CD1BP29016 333 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 ZNF718Q3SXZ3 478 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 FAM201AQ5SY85 155 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 JPT1Q9UK76 154 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 YLPM1P49750 1951 aaKnown RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 MBD3L4A6NDZ8 208 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 MBD3L3A6NE82 208 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 MBD3L5A6NJ08 208 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 FCGR3BO75015 233 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 GALR1P47211 349 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 FAM169BQ8N8A8 192 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 OR2Z1Q8NG97 314 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 OR52E5Q8NH55 327 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 MBD3L2Q8NHZ7 208 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 FAM222BQ8WU58 562 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 OTOGLQ3ZCN5 2332 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 AHRRA9YTQ3 701 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 HRASP01112 189 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 IFNA1P01562 189 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 CDC34P49427 236 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 PSMB3P49720 205 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 CT45A1Q5HYN5 189 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 CT45A3Q8NHU0 189 aa8.1□□□□□ -1.11
MSH2-202ENST00000406134 RNASEH2CQ8TDP1 164 aaKnown RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 CIB3Q96Q77 187 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 ACTR3CQ9C0K3 210 aaPredicted RBP8.1□□□□□ -1.11
MSH2-202ENST00000406134 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.09□□□□□ -1.11
MSH2-202ENST00000406134 C11orf94C9JXX5 98 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 HPRT1P00492 218 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 GZMBP10144 247 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 TUBG1P23258 451 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 BHLHA15Q7RTS1 189 aaPredicted RBP8.09□□□□□ -1.11
MSH2-202ENST00000406134 TUBG2Q9NRH3 451 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 YTHDF2Q9Y5A9 579 aaKnown RBP8.09□□□□□ -1.11
MSH2-202ENST00000406134 ZNF318Q5VUA4 2279 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 MMP23AO75900 390 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 C1QTNF9P0C862 333 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 CLEC12BQ2HXU8 276 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 SPATA31B1PQ5VZV4 182 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 ABHD12Q8N2K0 398 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 NINJ1Q92982 152 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
MSH2-202ENST00000406134 AURKAIP1Q9NWT8 199 aaPredicted RBP8.09□□□□□ -1.11
MSH2-202ENST00000406134 IGLV3-9A0A075B6K5 115 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 OPRK1P41145 380 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 NEIL1Q96FI4 390 aaPredicted RBP8.09□□□□□ -1.11
MSH2-202ENST00000406134 OR2V2Q96R30 315 aa8.09□□□□□ -1.11
MSH2-202ENST00000406134 PATZ1Q9HBE1 687 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms