RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 LOC105371267A0A1B0GV96 52 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 DXOO77932 396 aaKnown RBP6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 PCSK4Q6UW60 755 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 ATG4DQ86TL0 474 aaPredicted RBP6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 TEX45Q8NA69 505 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 TMEM171Q8WVE6 324 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 VGLL1Q99990 258 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 SIRT4Q9Y6E7 314 aaPredicted RBP6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 TNS1Q9HBL0 1735 aaKnown RBP6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 IGHV3-49A0A0A0MS15 119 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 CA11O75493 328 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 EVI2AP22794 236 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 LINC00158P58513 81 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 CLDND2Q8NHS1 167 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 KLHDC2Q9Y2U9 406 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 IGHV3-35A0A0C4DH35 117 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 FGF12P61328 243 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 CCL8P80075 99 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 VAX1Q5SQQ9 334 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 INO80CQ6PI98 192 aaPredicted RBP6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 CRYGNQ8WXF5 182 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 IGHV3OR16-10A0A075B7F0 116 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 IZUMO1RA6ND01 250 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 SPINT1O43278 529 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 CEACAM21Q3KPI0 293 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 NR2C2APQ86WQ0 139 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 OR10W1Q8NGF6 305 aa6.76□□□□□ -1.33
RBFOX2-205ENST00000405409 IGHV3OR16-13A0A075B7E8 117 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 IGHV3-74A0A0B4J1X5 117 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 CGAP01215 116 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 IGKCP01834 107 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 SRFP11831 508 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 TMEM91Q6ZNR0 172 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 TRIOBPQ9H2D6 2365 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 C2CD4DB7Z1M9 353 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 HMGA2P52926 109 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 C9orf153Q5TBE3 101 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 ST20Q9HBF5 79 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 LINC01565O15544 149 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 HOXB3P14651 431 aaPredicted RBP6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 LRTM2Q8N967 370 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 FER1L6-AS1Q8NA97 138 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 ZNF479Q96JC4 524 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 C19orf24Q9BVV8 132 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 S4R3C0 116 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 COL18A1P39060 1754 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 SSC5DA1L4H1 1573 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 SPTY2D1-AS1A0A0U1RR47 76 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 A0A1B0GUT8 65 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 CD33P20138 364 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 MSRB3Q8IXL7 192 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 PIMREGQ9BSJ6 248 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 ITGB1BP1O14713 200 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 NUTF2P61970 127 aaKnown RBP6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 ZNF146Q15072 292 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 ZNF625Q96I27 306 aaPredicted RBP6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 NRN1Q9NPD7 142 aa6.75□□□□□ -1.33
RBFOX2-205ENST00000405409 BGLAPP02818 100 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 IL6RP08887 468 aaPredicted RBP6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 UCP3P55916 312 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 RSPO2Q6UXX9 243 aaPredicted RBP6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 OR11H4Q8NGC9 324 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 NPIPB3Q92617 1050 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 A0A1W2PRS3 328 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 C16orf97H3BN30 126 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 CCL21O00585 134 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 IGLV3-27P01718 113 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 CD28P10747 220 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 PLNP26678 52 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 MARS2Q96GW9 593 aaKnown RBP6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 SERF1AO75920 110 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 IGKV1D-42A0A075B6H8 117 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 SPINK8P0C7L1 97 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 C2orf68Q2NKX9 166 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 C2orf82Q6UX34 121 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 TMEM174Q8WUU8 243 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 LOXL4Q96JB6 756 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 SMIM8Q96KF7 97 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 CLEC7AQ9BXN2 247 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 TMEM30AQ9NV96 361 aa6.74□□□□□ -1.33
RBFOX2-205ENST00000405409 A0A1W2PQD3 144 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 MARCH11A6NNE9 402 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 NPIPB11E5RHQ5 1161 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 ERVK11-1P61568 191 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 NHLRC3Q5JS37 347 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 GAGE2AQ6NT46 116 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 ZNF818PQ6ZRF7 136 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 RFLNBQ8N5W9 214 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 GGTLC1Q9BX51 225 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 NPCDR1Q9BY65 106 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 TIAM2Q8IVF5 1701 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 CDK5RAP2Q96SN8 1893 aa6.73□□□□□ -1.33
RBFOX2-205ENST00000405409 MGST3O14880 152 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms