RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 Q8TCH9 128 aa8.89□□□□□ -0.99
CLIP4-204ENST00000404424 SFRP2Q96HF1 295 aa8.89□□□□□ -0.99
CLIP4-204ENST00000404424 PRO1933Q9H354 126 aa8.89□□□□□ -0.99
CLIP4-204ENST00000404424 MS4A5Q9H3V2 200 aa8.89□□□□□ -0.99
CLIP4-204ENST00000404424 PATZ1Q9HBE1 687 aaKnown RBP8.89□□□□□ -0.99
CLIP4-204ENST00000404424 TMEM140Q9NV12 185 aa8.89□□□□□ -0.99
CLIP4-204ENST00000404424 DUSP13Q9UII6 198 aa8.89□□□□□ -0.99
CLIP4-204ENST00000404424 TRAV17A0A0B4J275 112 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 A0A0U1RQK1 487 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 MDFIC2A0A1B0GVS7 189 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF320A2RRD8 509 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 ARL14EPLP0DKL9 152 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 EGR1P18146 543 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 TRIP6Q15654 476 aaKnown RBP8.88□□□□□ -0.99
CLIP4-204ENST00000404424 OR4S2Q8NH73 311 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 IFI27L2Q9H2X8 130 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF71Q9NQZ8 489 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-204ENST00000404424 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 LSM4Q9Y4Z0 139 aaKnown RBP8.88□□□□□ -0.99
CLIP4-204ENST00000404424 TRAPPC1Q9Y5R8 145 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 AHRRA9YTQ3 701 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 MT-CO2P00403 227 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 CCL11P51671 97 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 SSTP61278 116 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 RPL39P5Q59GN2 51 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 MIC13Q5XKP0 118 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 BHLHA15Q7RTS1 189 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-204ENST00000404424 FDCSPQ8NFU4 85 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 DDB2Q92466 427 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 MEGF10Q96KG7 1140 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 PROCRQ9UNN8 238 aa8.88□□□□□ -0.99
CLIP4-204ENST00000404424 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-204ENST00000404424 TRAV9-1A0A075B6T8 112 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 C15orf61A6NNL5 157 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 A8MWP6 167 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 C1QTNF9P0C862 333 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF134P52741 427 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 RAB31Q13636 194 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF664Q8N3J9 261 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 GBGT1Q8N5D6 347 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 GCSAMQ8N6F7 178 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 M0R296 226 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 RHOBP62745 196 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 IQCJQ1A5X6 159 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 TEPPQ6URK8 271 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 VKORC1L1Q8N0U8 176 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 ABHD12Q8N2K0 398 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 DEFB123Q8N688 67 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 BEND2Q8NDZ0 799 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 SGMS2Q8NHU3 365 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 SDSLQ96GA7 329 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 PLPPR2Q96GM1 343 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 ELOVL5Q9NYP7 299 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 CALYQ9NYX4 217 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 FOXA2Q9Y261 457 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-204ENST00000404424 SLC25A15Q9Y619 301 aa8.87□□□□□ -0.99
CLIP4-204ENST00000404424 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF705GA8MUZ8 300 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 TNFSF13O75888 250 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 CGAP01215 116 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 CGB3P0DN86 165 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 CGB7P0DN87 165 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 RPL29P47914 159 aaKnown RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 YPEL3P61236 119 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 HSPE1P61604 102 aaKnown RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 MRPL41Q8IXM3 137 aaKnown RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 ZNF114Q8NC26 417 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 CORO2AQ92828 525 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 STARD4Q96DR4 205 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 FAM234AQ9H0X4 552 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 OPN3Q9H1Y3 402 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 LY96Q9Y6Y9 160 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 NKX2-8O15522 239 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 LHBP01229 141 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 IGHV3-13P01766 116 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 IL6RP08887 468 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-204ENST00000404424 NPY1RP25929 384 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 THBS3P49746 956 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 SLC24A4Q8NFF2 622 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 ADTRPQ96IZ2 230 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 TMEM14BQ9NUH8 114 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 ARL2-SNX15V9GYD0 113 aa8.86□□□□□ -0.99
CLIP4-204ENST00000404424 HCFC1P51610 2035 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 TRBV20OR9-2A0A075B6H5 130 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 SCO2A0A1W2PP80 73 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 BMP5P22003 454 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 GCHFRP30047 84 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 TIMP3P35625 211 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 EFNB3Q15768 340 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 ARSJQ5FYB0 599 aaPredicted RBP8.85□□□□□ -0.99
CLIP4-204ENST00000404424 TEX38Q6PEX7 206 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 ZNRF1Q8ND25 227 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 C11orf52Q96A22 123 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 C1orf159Q96HA4 380 aa8.85□□□□□ -0.99
CLIP4-204ENST00000404424 UHRF2Q96PU4 802 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 560.5 ms