RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
CACNA1C-215ENST00000399637 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
CACNA1C-215ENST00000399637 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-215ENST00000399637 TMEM160Q9NX00 188 aa9.47□□□□□ -0.89
CACNA1C-215ENST00000399637 C5orf47Q569G3 176 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 C2orf88Q9BSF0 95 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 MRPL16Q9NX20 251 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 LOC102723996A0A087X1L8 192 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 A0A0G2JLM5 398 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 RND2P52198 227 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 PMCHL1Q16048 86 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 TBR1Q16650 682 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 OR51M1Q9H341 326 aa9.46□□□□□ -0.89
CACNA1C-215ENST00000399637 H3BTX0 84 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 FAM27BQ5VT28 67 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 SPSB2Q99619 263 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 GREB1LQ9C091 1923 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 NPIPB11E5RHQ5 1161 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 IL11P20809 199 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 C10orf128Q5T292 105 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 SLC25A45Q8N413 288 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 SRSF12Q8WXF0 261 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 SPSB4Q96A44 273 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 NRTNQ99748 197 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 MRPL18Q9H0U6 180 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 FGF5P12034 268 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 DSCR9P59020 149 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 ERVK11-1P61568 191 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 CD200R1LQ6Q8B3 271 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 PMCHL2Q9BQD1 86 aa9.46□□□□□ -0.9
CACNA1C-215ENST00000399637 IGHV3-64A0A075B6Q5 118 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 NDUFS5O43920 106 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 EFNB2P52799 333 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 BHLHA9Q7RTU4 235 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 ZNF501Q96CX3 271 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 MPTX1A8MV57 137 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 PEBP1P30086 187 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 OR10S1Q8NGN2 331 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 LEAP2Q969E1 77 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 NRIP2Q9BQI9 281 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 A0A1W2PPV9 198 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 DNAJC4Q9NNZ3 241 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 FAM206AQ9NX38 181 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 A0A0J9YW62 118 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 SLC25A20O43772 301 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 ASAH2BP0C7U1 165 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 TCF24Q7RTU0 167 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 ZAR1Q86SH2 424 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 TXNDC17Q9BRA2 123 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 A0A1W2PQF6 199 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 SCTP09683 121 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 CXCL3P19876 107 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 CSRP1P21291 193 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 OR4D5Q8NGN0 318 aa9.45□□□□□ -0.9
CACNA1C-215ENST00000399637 A0A1W2PQM1 296 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 KLHDC2Q9Y2U9 406 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 S4R3C0 116 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 LY75O60449 1722 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 NDUFS8O00217 210 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 PGLYRP1O75594 196 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 GATA4P43694 442 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 SELENOHQ8IZQ5 122 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 ZNF562Q6V9R5 426 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 PRELID3AQ96N28 172 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 CYSLTR1Q9Y271 337 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 H7C1H1 209 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 ARL14EPLP0DKL9 152 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 ZNF250P15622 560 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 MMP16P51512 607 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 RUNX1Q01196 453 aa9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-215ENST00000399637 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms