RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 ZFP36L1Q07352 338 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 ZNF236Q9UL36 1845 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 CLRN3Q8NCR9 226 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 RRHO14718 337 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 SIAH2O43255 324 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 ICAM4Q14773 271 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 PEMTQ9UBM1 199 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 CKAP5Q14008 2032 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 CORTO00230 105 aa11.66□□□□□ -0.54
CACNA1C-211ENST00000399617 TRBV5-3A0A0A0MS03 114 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 OPN4Q9UHM6 478 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 CD74P04233 296 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 PET117Q6UWS5 81 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 VAX2Q9UIW0 290 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 TSPOP30536 169 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 FOXC2Q99958 501 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 EGR1P18146 543 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 OR51M1Q9H341 326 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 ARFGEF1Q9Y6D6 1849 aa11.65□□□□□ -0.54
CACNA1C-211ENST00000399617 HSPE1P61604 102 aaKnown RBP11.65□□□□□ -0.55
CACNA1C-211ENST00000399617 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.55
CACNA1C-211ENST00000399617 NCMAPQ5T1S8 102 aa11.65□□□□□ -0.55
CACNA1C-211ENST00000399617 GGCTO75223 188 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 TCF19Q9Y242 345 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 PSG9Q00887 426 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 ZNF385CQ66K41 422 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 OR11H7Q8NGC8 314 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 MAP1BP46821 2468 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 FGFBP3Q8TAT2 258 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 GRIFINA4D1Z8 144 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 H0Y980 276 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 PRSS2P07478 247 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 NAT1P18440 290 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 CRYBB3P26998 211 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 SRSF4Q08170 494 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 C12orf77C9JDV5 145 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 GCM2O75603 506 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 KLF7O75840 302 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 CD1AP06126 327 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 SELLP14151 372 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 Q5PR19 223 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 RUSC1-AS1Q66K80 236 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 CTHRC1Q96CG8 243 aa11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 PDCD11Q14690 1871 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-211ENST00000399617 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 KBTBD11O94819 623 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 IGHV3-73A0A0B4J1V6 119 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 FAM3BP58499 235 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 CHAC2Q8WUX2 184 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 PLXNA1Q9UIW2 1896 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 PTGDSP41222 190 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 UQCRFS1P47985 274 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 TMEM127O75204 238 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 AWAT1Q58HT5 328 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 V9GYH0 126 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 TRAV30A0A087WSZ9 112 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 M0R143 59 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 IGHV3-53P01767 116 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 CACNG7P62955 275 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 TDGF1P13385 188 aa11.63□□□□□ -0.55
CACNA1C-211ENST00000399617 C17orf98A8MV24 154 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 ASPHD2Q6ICH7 369 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 AICDAQ9GZX7 198 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 TPRP12270 2363 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 CD99P14209 185 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 BEX4Q9NWD9 120 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 A0A0G2JLM5 398 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 RIPPLY2Q5TAB7 128 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 TMEM45BQ96B21 275 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 SURF2Q15527 256 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 ZNF343Q6P1L6 599 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 WDR73Q6P4I2 378 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 LINC00470Q9BZP3 86 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 SH3BGRL3Q9H299 93 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 MSRB2Q9Y3D2 182 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 PDE6DO43924 150 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 GATA4P43694 442 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 MRAP2Q96G30 205 aa11.62□□□□□ -0.55
CACNA1C-211ENST00000399617 GALP22466 123 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms