RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 CMSS1Q9BQ75 279 aaKnown RBP13.18□□□□□ -0.3
UFD1-202ENST00000399523 CABLES2Q9BTV7 478 aa13.18□□□□□ -0.3
UFD1-202ENST00000399523 ZNF436Q9C0F3 470 aaPredicted RBP13.18□□□□□ -0.3
UFD1-202ENST00000399523 HRH4Q9H3N8 390 aa13.18□□□□□ -0.3
UFD1-202ENST00000399523 TRBV6-7A0A0A0MS04 114 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 BET1O15155 118 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 DEFB4AO15263 64 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 FABP7O15540 132 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 BPNT1O95861 308 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 ZNF735P0CB33 412 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 AREGP15514 252 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 IGSF11Q5DX21 431 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 APRG1Q8IVJ8 170 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 OR10J5Q8NHC4 309 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 URM1Q9BTM9 101 aaKnown RBP13.17□□□□□ -0.3
UFD1-202ENST00000399523 OR51E2Q9H255 320 aa13.17□□□□□ -0.3
UFD1-202ENST00000399523 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 DIRAS3O95661 229 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 RPL27AP46776 148 aaKnown RBP13.16□□□□□ -0.3
UFD1-202ENST00000399523 ZNF575Q86XF7 245 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 OR4A5Q8NH83 315 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 ARHGAP5-AS1Q96IT6 56 aa13.16□□□□□ -0.3
UFD1-202ENST00000399523 IGHV4-4A0A075B6R2 117 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 CELP19835 753 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 GPR183P32249 361 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 PYDC1Q8WXC3 89 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 PHYHIPQ92561 330 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 TMEM80Q96HE8 168 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 PECRQ9BY49 303 aa13.15□□□□□ -0.3
UFD1-202ENST00000399523 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.3
UFD1-202ENST00000399523 MAS1LP35410 378 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 INSL4Q14641 139 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 IRF3Q14653 427 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 ZNF124Q15973 351 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 NR2C2APQ86WQ0 139 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 VKORC1L1Q8N0U8 176 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 OR6M1Q8NGM8 313 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 DCUN1D5Q9BTE7 237 aa13.14□□□□□ -0.31
UFD1-202ENST00000399523 RBM7Q9Y580 266 aaKnown RBP13.14□□□□□ -0.31
UFD1-202ENST00000399523 FCGR3BO75015 233 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 KBTBD11O94819 623 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 ARFRP1Q13795 201 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 PUSL1Q8N0Z8 303 aaKnown RBP13.13□□□□□ -0.31
UFD1-202ENST00000399523 TMEM167AQ8TBQ9 72 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 RNF126Q9BV68 326 aa13.13□□□□□ -0.31
UFD1-202ENST00000399523 TRAV10A0A0B4J240 114 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 M0R2N4 97 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 CTSDP07339 412 aaPredicted RBP13.12□□□□□ -0.31
UFD1-202ENST00000399523 DEFA4P12838 97 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 CMC4P56277 68 aaPredicted RBP13.12□□□□□ -0.31
UFD1-202ENST00000399523 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 PVRIGQ6DKI7 326 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 Q8NAQ8 132 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 VSTM2AQ8TAG5 236 aa13.12□□□□□ -0.31
UFD1-202ENST00000399523 TGOLN2O43493 480 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 CDK1P06493 297 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 FCGR3AP08637 254 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 RPA2P15927 270 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 PTBP1P26599 531 aaKnown RBP eCLIP13.11□□□□□ -0.31
UFD1-202ENST00000399523 HLA-DMBP28068 263 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 PSMD7P51665 324 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 TMEM187Q14656 261 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 RBM48Q5RL73 367 aaKnown RBP13.11□□□□□ -0.31
UFD1-202ENST00000399523 H1FOOQ8IZA3 346 aaPredicted RBP13.11□□□□□ -0.31
UFD1-202ENST00000399523 ZNF645Q8N7E2 425 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 KCNK7Q9Y2U2 307 aa13.11□□□□□ -0.31
UFD1-202ENST00000399523 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 K7EMT4 169 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 REG1AP05451 166 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 P0DMU3 169 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 FAM231AP0DMU4 169 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 FAM231CP0DMU5 169 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 Q6ZTC4 211 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 SSX9Q7RTT3 188 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 GINS4Q9BRT9 223 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
UFD1-202ENST00000399523 PRELID3BQ9Y3B1 194 aa13.1□□□□□ -0.31
UFD1-202ENST00000399523 LRP1BQ9NZR2 4599 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 CGB1A6NKQ9 187 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 CDK2AP2O75956 126 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
UFD1-202ENST00000399523 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
UFD1-202ENST00000399523 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 ST3GAL4Q11206 333 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 P2RY14Q15391 338 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
UFD1-202ENST00000399523 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 OR56B1Q8NGI3 324 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 C9orf16Q9BUW7 83 aa13.09□□□□□ -0.31
UFD1-202ENST00000399523 ETV7Q9Y603 341 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms