RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRAV41A0A0B4J266 112 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 ARRDC5A6NEK1 342 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 A8MUN3 132 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 IFI30P13284 250 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 CCR7P32248 378 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 IDH3GP51553 393 aaPredicted RBP1.01□□□□□ -2.25
CD47-203ENST00000398258 POLR2GP62487 172 aaKnown RBP eCLIP1.01□□□□□ -2.25
CD47-203ENST00000398258 RELAQ04206 551 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 PRDX4Q13162 271 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 OR2F1Q13607 317 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 ZNF791Q3KP31 576 aaPredicted RBP1.01□□□□□ -2.25
CD47-203ENST00000398258 ACSM3Q53FZ2 586 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 FAM201AQ5SY85 155 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 SYPL2Q5VXT5 272 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 LPCAT4Q643R3 524 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 LYZL1Q6UWQ5 148 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 ALKAL1Q6UXT8 129 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 HIST2H3AQ71DI3 136 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 OR8J2Q8NGG1 315 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 OR13C8Q8NGS7 320 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 DIRAS2Q96HU8 199 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 NMNAT3Q96T66 252 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 TTTY13Q9BZ97 58 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 OR51I1Q9H343 314 aa1.01□□□□□ -2.25
CD47-203ENST00000398258 RSL24D1Q9UHA3 163 aaKnown RBP1.01□□□□□ -2.25
CD47-203ENST00000398258 RBM7Q9Y580 266 aaKnown RBP1.01□□□□□ -2.25
CD47-203ENST00000398258 DISP1Q96F81 1524 aa1□□□□□ -2.25
CD47-203ENST00000398258 SORL1Q92673 2214 aa1□□□□□ -2.25
CD47-203ENST00000398258 EVC2Q86UK5 1308 aa1□□□□□ -2.25
CD47-203ENST00000398258 SCN9AQ15858 1988 aa1□□□□□ -2.25
CD47-203ENST00000398258 TMSB15BA0A087X1C1 80 aa1□□□□□ -2.25
CD47-203ENST00000398258 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1□□□□□ -2.25
CD47-203ENST00000398258 A0A0J9YW62 118 aa1□□□□□ -2.25
CD47-203ENST00000398258 ZNF705FA8MVS1 300 aaPredicted RBP1□□□□□ -2.25
CD47-203ENST00000398258 M0R036 132 aa1□□□□□ -2.25
CD47-203ENST00000398258 KCNK1O00180 336 aa1□□□□□ -2.25
CD47-203ENST00000398258 OVOL1O14753 267 aa1□□□□□ -2.25
CD47-203ENST00000398258 PLA2G10O15496 165 aa1□□□□□ -2.25
CD47-203ENST00000398258 BPGMP07738 259 aa1□□□□□ -2.25
CD47-203ENST00000398258 SERPINA6P08185 405 aa1□□□□□ -2.25
CD47-203ENST00000398258 HIST1H1EP10412 219 aaKnown RBP1□□□□□ -2.25
CD47-203ENST00000398258 PSMB8P28062 276 aa1□□□□□ -2.25
CD47-203ENST00000398258 CA5AP35218 305 aa1□□□□□ -2.25
CD47-203ENST00000398258 MAP2K4P45985 399 aa1□□□□□ -2.25
CD47-203ENST00000398258 SLCO1A2P46721 670 aa1□□□□□ -2.25
CD47-203ENST00000398258 EMP1P54849 157 aa1□□□□□ -2.25
CD47-203ENST00000398258 CAV1Q03135 178 aa1□□□□□ -2.25
CD47-203ENST00000398258 AKR1C1Q04828 323 aa1□□□□□ -2.25
CD47-203ENST00000398258 RGS21Q2M5E4 152 aa1□□□□□ -2.25
CD47-203ENST00000398258 KRTAP21-3Q3LHN1 58 aa1□□□□□ -2.25
CD47-203ENST00000398258 C8orf74Q6P047 294 aa1□□□□□ -2.25
CD47-203ENST00000398258 SLC35E3Q7Z769 313 aa1□□□□□ -2.25
CD47-203ENST00000398258 TMEM86BQ8N661 226 aa1□□□□□ -2.25
CD47-203ENST00000398258 OR1L8Q8NGR8 309 aa1□□□□□ -2.25
CD47-203ENST00000398258 SLC35B4Q969S0 331 aa1□□□□□ -2.25
CD47-203ENST00000398258 ROPN1LQ96C74 230 aa1□□□□□ -2.25
CD47-203ENST00000398258 TIMM21Q9BVV7 248 aa1□□□□□ -2.25
CD47-203ENST00000398258 MRPS26Q9BYN8 205 aaKnown RBP1□□□□□ -2.25
CD47-203ENST00000398258 CXorf21Q9HAI6 301 aa1□□□□□ -2.25
CD47-203ENST00000398258 GUCA1BQ9UMX6 200 aa1□□□□□ -2.25
CD47-203ENST00000398258 ANGPT4Q9Y264 503 aa1□□□□□ -2.25
CD47-203ENST00000398258 MDC1Q14676 2089 aaKnown RBP1□□□□□ -2.25
CD47-203ENST00000398258 MUC6Q6W4X9 2439 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 COL11A1P12107 1806 aaPredicted RBP0.99□□□□□ -2.25
CD47-203ENST00000398258 MYO3BQ8WXR4 1341 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 WDR90Q96KV7 1748 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 TGIF2-C20orf24A0A0A6YYL0 155 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 A0A1B0GV50 99 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 INMT-MINDY4F8WBC2 141 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 TXNDC9O14530 226 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 LYPLA2O95372 231 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 NSA2O95478 260 aaKnown RBP0.99□□□□□ -2.25
CD47-203ENST00000398258 TNNC2P02585 160 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 C1QAP02745 245 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 IGKV1-16P04430 117 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 CALB1P05937 261 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 HINT1P49773 126 aaPredicted RBP0.99□□□□□ -2.25
CD47-203ENST00000398258 AP1S1P61966 158 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 FABP9Q0Z7S8 132 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 PMAIP1Q13794 54 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 Q6ZRN7 208 aaPredicted RBP0.99□□□□□ -2.25
CD47-203ENST00000398258 SSX8Q7RTT4 187 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 OR51D1Q8NGF3 324 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 OR4X2Q8NGF9 303 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 VCX3BQ9H321 246 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 CUL9Q8IWT3 2517 aa0.99□□□□□ -2.25
CD47-203ENST00000398258 DENND4BO75064 1496 aaPredicted RBP0.99□□□□□ -2.25
CD47-203ENST00000398258 MPDZO75970 2070 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 TRAV7A0A075B6U4 112 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 NAPSAO96009 420 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 IFNA16P05015 189 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 RPS17P08708 135 aaKnown RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 SRP19P09132 144 aaKnown RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 LGALS1P09382 135 aaKnown RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 FAM228BP0C875 321 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 FGF6P10767 208 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 PEBP1P30086 187 aaKnown RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 RAP1GDS1P52306 607 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 TPI1P60174 286 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 GLO1Q04760 184 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms