RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 KBTBD11O94819 623 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 LHX2P50458 406 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 SH3BGRL3Q9H299 93 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 C1QTNF12Q5T7M4 302 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 SAXO1Q8IYX7 474 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 SGMS2Q8NHU3 365 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A10PA6NDY2 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A18PA6NE21 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A16PA6NEW6 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A20PA6NIJ5 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A8PA6NJQ4 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A7PA6NKC0 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A22PA8MWA6 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A12PA8MX19 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A5PA8MXJ8 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A23PA8MXZ1 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A15PP0C7V4 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A13PP0C7W8 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A14PP0C7W9 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 FAM90A24PP0C7X0 464 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 ZNF146Q15072 292 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 C3orf36Q3SXR2 165 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 OR51G1Q8NGK1 321 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 ZXDCQ2QGD7 858 aaPredicted RBP9.61□□□□□ -0.87
TTC28-201ENST00000397906 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 RAB37Q96AX2 223 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 BCL2P10415 239 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 CCL3L1P16619 93 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 GALNT14Q96FL9 552 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 TPRP12270 2363 aaKnown RBP9.61□□□□□ -0.87
TTC28-201ENST00000397906 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
TTC28-201ENST00000397906 FAM3BP58499 235 aaPredicted RBP9.61□□□□□ -0.87
TTC28-201ENST00000397906 LINC00470Q9BZP3 86 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 AP4M1O00189 453 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 DEFB121Q5J5C9 76 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 GLMPQ8WWB7 406 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 C17orf100A8MU93 164 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 PLA2G10O15496 165 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 THBDP07204 575 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 H1FOOQ8IZA3 346 aaPredicted RBP9.61□□□□□ -0.87
TTC28-201ENST00000397906 DEPPQ9NTK1 212 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 A8MWL6 223 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
TTC28-201ENST00000397906 CABIN1Q9Y6J0 2220 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 CA2P00918 260 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 ZNF343Q6P1L6 599 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 TMEM252Q8N6L7 170 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 DMRTA2Q96SC8 542 aa9.61□□□□□ -0.87
TTC28-201ENST00000397906 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
TTC28-201ENST00000397906 MRPS18AQ9NVS2 196 aaKnown RBP9.6□□□□□ -0.87
TTC28-201ENST00000397906 TAF15Q92804 592 aaKnown RBP eCLIP9.6□□□□□ -0.87
TTC28-201ENST00000397906 TNFSF18Q9UNG2 199 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 TRGV2A0A075B6R0 118 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 SIAH2O43255 324 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 CRYBB3P26998 211 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 IGLV3-19P01714 112 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 C1QL2Q7Z5L3 287 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 WFDC12Q8WWY7 111 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 LINC01587Q99440 93 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 MRPL20Q9BYC9 149 aaKnown RBP9.6□□□□□ -0.87
TTC28-201ENST00000397906 PAM16Q9Y3D7 125 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 TCRBV4S1A1TA0A5B7 111 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 MEIG1Q5JSS6 88 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 STHQ8IWL8 128 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 LYRM2Q9NU23 88 aaPredicted RBP9.6□□□□□ -0.87
TTC28-201ENST00000397906 PINLYPA6NC86 204 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 HLA-DQB1P01920 261 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 MRPL14Q6P1L8 145 aaKnown RBP9.6□□□□□ -0.87
TTC28-201ENST00000397906 ZIC4Q8N9L1 334 aa9.6□□□□□ -0.87
TTC28-201ENST00000397906 B4DEV8 164 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 M0R381 172 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SEC11BP0C7V7 166 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 FOXF2Q12947 444 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 LINC00527Q9UJ94 153 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 PTPRFP10586 1907 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 C7orf77A4D0Y5 90 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 NABP2Q9BQ15 211 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 A0A0G2JMZ2 1700 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 LRRC37A2A6NM11 1700 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 C9orf62Q8N4C0 152 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 P2RY4P51582 365 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SIPA1L1O43166 1804 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 RALGAPA2Q2PPJ7 1873 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 GTSCR1Q86UQ5 136 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SUMO2P61956 95 aaKnown RBP9.59□□□□□ -0.87
TTC28-201ENST00000397906 SERF2P84101 59 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 C5orf66Q9H5L9 145 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 TRAV20A0A0B4J274 112 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 C12orf77C9JDV5 145 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SCN8AQ9UQD0 1980 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 RRHO14718 337 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 C8orf88P0DMB2 117 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SRSF6Q13247 344 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms