RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 RBM7Q9Y580 266 aaKnown RBP12.3□□□□□ -0.44
CUX2-202ENST00000397643 SAA2-SAA4A0A096LPE2 208 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 M0QYG6 137 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 CD74P04233 296 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 SAA2P0DJI9 122 aaPredicted RBP12.29□□□□□ -0.44
CUX2-202ENST00000397643 NFYAP23511 347 aaPredicted RBP12.29□□□□□ -0.44
CUX2-202ENST00000397643 FCGR2CP31995 323 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 FAUP35544 74 aaKnown RBP12.29□□□□□ -0.44
CUX2-202ENST00000397643 TSPAN5P62079 268 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 ZNF57Q68EA5 555 aaPredicted RBP12.29□□□□□ -0.44
CUX2-202ENST00000397643 OR6F1Q8NGZ6 308 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 RSRP1Q9BUV0 290 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 C11orf54Q9H0W9 315 aaPredicted RBP12.29□□□□□ -0.44
CUX2-202ENST00000397643 RETNQ9HD89 108 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 OR2W1Q9Y3N9 320 aa12.29□□□□□ -0.44
CUX2-202ENST00000397643 HERC2O95714 4834 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 DISC1C4P0D8 188 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 FCN1O00602 326 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 TUSC2O75896 110 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 IL7P13232 177 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
CUX2-202ENST00000397643 DHRS11Q6UWP2 260 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 IL34Q6ZMJ4 242 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 ARRDC1Q8N5I2 433 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 DEDD2Q8WXF8 326 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 TINAGL1Q9GZM7 467 aaPredicted RBP12.28□□□□□ -0.44
CUX2-202ENST00000397643 PARP12Q9H0J9 701 aaKnown RBP12.28□□□□□ -0.44
CUX2-202ENST00000397643 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
CUX2-202ENST00000397643 J3QRK9 145 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 RRHO14718 337 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 ARPC1BO15143 372 aaKnown RBP12.27□□□□□ -0.45
CUX2-202ENST00000397643 ST8SIA5O15466 376 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 AADACP22760 399 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 TPPP2P59282 170 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 HERV-K104P61576 105 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 MS4A10Q96PG2 267 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 ZNF2Q9BSG1 426 aaPredicted RBP12.27□□□□□ -0.45
CUX2-202ENST00000397643 FAM103A1Q9BTL3 118 aaKnown RBP12.27□□□□□ -0.45
CUX2-202ENST00000397643 IFI27L2Q9H2X8 130 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 PIPOXQ9P0Z9 390 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 ZNF221Q9UK13 617 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 KMT2AQ03164 3969 aa12.27□□□□□ -0.45
CUX2-202ENST00000397643 RAB29O14966 203 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 SLC22A5O76082 557 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 PPYP01298 95 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 AKIRIN2Q53H80 203 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 OR4D10Q8NGI6 311 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 OR4C16Q8NGL9 310 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 HIPK2Q9H2X6 1198 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 RNF150Q9ULK6 438 aa12.26□□□□□ -0.45
CUX2-202ENST00000397643 CENPXA8MT69 81 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 FXYD4P59646 89 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
CUX2-202ENST00000397643 FAM71F2Q6NXP2 309 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 UNQ5815/PRO19632Q6UWF5 114 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 LINC00322Q6ZN03 302 aaPredicted RBP12.25□□□□□ -0.45
CUX2-202ENST00000397643 PPP1R27Q86WC6 154 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.25□□□□□ -0.45
CUX2-202ENST00000397643 LFNGQ8NES3 379 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 MOB3AQ96BX8 217 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 ABHD14BQ96IU4 210 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 PRRT1Q99946 306 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 FAM110AQ9BQ89 295 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 C7orf50Q9BRJ6 194 aaKnown RBP12.25□□□□□ -0.45
CUX2-202ENST00000397643 AGMATQ9BSE5 352 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 OR2D2Q9H210 308 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 SLA2Q9H6Q3 261 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 HRASLSQ9HDD0 168 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 MCUBQ9NWR8 336 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 SCP2D1Q9UJQ7 156 aa12.25□□□□□ -0.45
CUX2-202ENST00000397643 LINC00854A0A1B0GVQ3 168 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 NAP1L6A6NFF2 107 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 UPK1BO75841 260 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 ZNF735P0CB33 412 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 CT45A6P0DMU7 189 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 CT45A5P0DMU8 189 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 CT45A7P0DMV0 189 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 ZP3P21754 424 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 KLF5Q13887 457 aaPredicted RBP12.24□□□□□ -0.45
CUX2-202ENST00000397643 SCGB2B2Q4G0G5 96 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 FAAP20Q6NZ36 180 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 LPCAT3Q6P1A2 487 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 OR9G4Q8NGQ1 327 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 TERB2Q8NHR7 220 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 SECTM1Q8WVN6 248 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 BORCS5Q969J3 196 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 SLC5A7Q9GZV3 580 aa12.24□□□□□ -0.45
CUX2-202ENST00000397643 IGKV1D-13A0A0B4J2D9 117 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 H0Y980 276 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 H0YJW9 148 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 TRGV3P03979 118 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 IGKV1-13P0DP09 117 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 GLDNQ6ZMI3 551 aaPredicted RBP12.23□□□□□ -0.45
CUX2-202ENST00000397643 ZNF645Q8N7E2 425 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
CUX2-202ENST00000397643 IL17DQ8TAD2 202 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms