RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FREM1Q5H8C1 2179 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 PITX3O75364 302 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 DUTP33316 252 aaKnown RBP6.85□□□□□ -1.31
PTPRD-204ENST00000397606 HAGHQ16775 308 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 TIGITQ495A1 244 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 Q5PR19 223 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 CLEC9AQ6UXN8 241 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 VMO1Q7Z5L0 202 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 LHFPL1Q86WI0 220 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 CXorf58Q96LI9 332 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 JMJD8Q96S16 334 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 PUS1Q9Y606 427 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPRD-204ENST00000397606 NOTCH2Q04721 2471 aa6.85□□□□□ -1.31
PTPRD-204ENST00000397606 SMIM8Q96KF7 97 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 GINS3Q9BRX5 216 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 LYRM2Q9NU23 88 aaPredicted RBP6.84□□□□□ -1.31
PTPRD-204ENST00000397606 MBNL3Q9NUK0 354 aaKnown RBP6.84□□□□□ -1.31
PTPRD-204ENST00000397606 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 B2MP61769 119 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 SELENOTP62341 195 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 OR1B1Q8NGR6 318 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 OR5AC2Q9NZP5 309 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 JKAMPQ9P055 326 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 MAP1LC3B2A6NCE7 125 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 NBR2O15453 112 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 PRTN3P24158 256 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 BTCP35070 178 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 H2BFSP57053 126 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 MAP1LC3BQ9GZQ8 125 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 DOK5Q9P104 306 aa6.84□□□□□ -1.31
PTPRD-204ENST00000397606 ZNF737O75373 536 aa6.84□□□□□ -1.32
PTPRD-204ENST00000397606 HLA-DRB5Q30154 266 aa6.84□□□□□ -1.32
PTPRD-204ENST00000397606 C11orf91Q3C1V1 193 aa6.84□□□□□ -1.32
PTPRD-204ENST00000397606 SSMEM1Q8WWF3 244 aa6.84□□□□□ -1.32
PTPRD-204ENST00000397606 TECRQ9NZ01 308 aaKnown RBP6.84□□□□□ -1.32
PTPRD-204ENST00000397606 MKI67P46013 3256 aaKnown RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 MDFIC2A0A1B0GVS7 189 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 HIST1H1BP16401 226 aaKnown RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 PRB3Q04118 309 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SLC7A5P1Q8MH63 180 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 STXBP6Q8NFX7 210 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 CLDND2Q8NHS1 167 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 DCAF16Q9NXF7 216 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 ZNF581Q9P0T4 197 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 ATRXP46100 2492 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 PLCE1Q9P212 2302 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 TIMM23O14925 209 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 MSMBP08118 114 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 OR10J4P0C629 311 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 NHLH2Q02577 135 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 C9orf62Q8N4C0 152 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 OR4X1Q8NH49 305 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SUN5Q8TC36 379 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 MALSU1Q96EH3 234 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 P2RX4Q99571 388 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 NPFFR1Q9GZQ6 430 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 TMEM231Q9H6L2 316 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 BEX4Q9NWD9 120 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 KAAG1Q9UBP8 84 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 CD8AP01732 235 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 MAS1LP35410 378 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 MFAP4P55083 255 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 CD300CQ08708 224 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SLC35E3Q7Z769 313 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 RBM14Q96PK6 669 aaKnown RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 WNK2Q9Y3S1 2297 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 TRAV30A0A087WSZ9 112 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SEC11BP0C7V7 166 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 MGST1P10620 155 aaKnown RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 RAB4BP61018 213 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 LGALSLQ3ZCW2 172 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SLC25A48Q6ZT89 311 aaKnown RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 CENPVQ7Z7K6 275 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 Q8NFD4 153 aa6.83□□□□□ -1.32
PTPRD-204ENST00000397606 RNF166Q96A37 237 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-204ENST00000397606 IGHV3-21A0A0B4J1V1 117 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 RNF223E7ERA6 249 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 ITGB1BP1O14713 200 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 SERF2P84101 59 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 FAM78BQ5VT40 261 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 KCNIP4Q6PIL6 250 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 TEX45Q8NA69 505 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 AQP10Q96PS8 301 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 TMEM167BQ9NRX6 74 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 TBL2Q9Y4P3 447 aaKnown RBP6.82□□□□□ -1.32
PTPRD-204ENST00000397606 SAA1P0DJI8 122 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-204ENST00000397606 AKR1C3P42330 323 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 TPTE2P1Q5T6R2 138 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 RXFP4Q8TDU9 374 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 ARPC1AQ92747 370 aa6.82□□□□□ -1.32
PTPRD-204ENST00000397606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms