RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 CD24P25063 80 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 LGALS7P47929 136 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 SMCO1Q147U7 214 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 OR4A47Q6IF82 309 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 TCTE3Q8IZS6 198 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 PUSL1Q8N0Z8 303 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 EAF1Q96JC9 268 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 RNF5Q99942 180 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 AIFM2Q9BRQ8 373 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 CACNG5Q9UF02 275 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 G3V3Q6 166 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 MOSP00540 346 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 FBP1P09467 338 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 CNTFRP26992 372 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 BRS3P32247 399 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 DYNLT3P51808 116 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 CYCSP99999 105 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 THNSL2Q86YJ6 484 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 BCL6BQ8N143 479 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 Q8N6K4 173 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 OR2T10Q8NGZ9 312 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 COA4Q9NYJ1 87 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 GSKIPQ9P0R6 139 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 FAM96BQ9Y3D0 163 aa13.55□□□□□ -0.24
TSPAN4-205ENST00000397406 UBE2KP61086 200 aa13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 THOC7Q6I9Y2 204 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 TEX29Q8N6K0 151 aa13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 TSNAXQ99598 290 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 C19orf24Q9BVV8 132 aa13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
TSPAN4-205ENST00000397406 TRAV3A0A0B4J244 114 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 CRYGBP07316 175 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 FAM106CPP0CH98 169 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 RELBQ01201 579 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 HES1Q14469 280 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 PSG5Q15238 335 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 DEFB112Q30KQ8 113 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 Q5BKY6 102 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 OR2T35Q8NGX2 323 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 PPP1R1CQ8WVI7 109 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 NSG2Q9Y328 171 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 TNCP24821 2201 aa13.53□□□□□ -0.24
TSPAN4-205ENST00000397406 MDFIC2A0A1B0GVS7 189 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 SMLR1H3BR10 107 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 UPK2O00526 184 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 SLC25A17O43808 307 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 KBTBD11O94819 623 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 SPDEFO95238 335 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 HNF1AP20823 631 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 F2RL1P55085 397 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 HNF4GQ14541 408 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 LRRC75BQ2VPJ9 315 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 AARDQ4LEZ3 155 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 NPBQ8NG41 125 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 OR1S1Q8NH92 325 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 TMEM167AQ8TBQ9 72 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 PLSCR3Q9NRY6 295 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 ANK2Q01484 3957 aa13.52□□□□□ -0.25
TSPAN4-205ENST00000397406 TRAV14DV4A0A0A6YYC5 116 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 NDUFA3O95167 84 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 MBPP02686 304 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 TMEM11P17152 192 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 OR2B8PP59922 312 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 ID3Q02535 119 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 RAB32Q13637 225 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 AANATQ16613 207 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 CXorf66Q5JRM2 361 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 TEX45Q8NA69 505 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 OR4A5Q8NH83 315 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 SSX3Q99909 188 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
TSPAN4-205ENST00000397406 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 RRHO14718 337 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 NBR2O15453 112 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 PSMB6P28072 239 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 NKX2-1P43699 371 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 MMDQ15546 238 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 LRRC37A5PQ49AS3 106 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 ZNF429Q86V71 674 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 OR4A16Q8NH70 328 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 QTRT1Q9BXR0 403 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 TMEM14BQ9NUH8 114 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 SIGLEC9Q9Y336 463 aa13.5□□□□□ -0.25
TSPAN4-205ENST00000397406 FAM90A26D6RGX4 464 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 K7EPK0 472 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 ST8SIA3O43173 380 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 SNAPC5O75971 98 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 NXPH3O95157 252 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 MPC2O95563 127 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 SCGB1D2O95969 90 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms