RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZNF256Q9Y2P7 627 aaPredicted RBP10.76□□□□□ -0.69
SEC13-204ENST00000397099 ZNF257Q9Y2Q1 563 aa10.76□□□□□ -0.69
SEC13-204ENST00000397099 DPPA5A6NC42 116 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 RCVRNP35243 200 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 ECI1P42126 302 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 FXYD4P59646 89 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 CTF1Q16619 201 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 POU2AF1Q16633 256 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 OR2B11Q5JQS5 317 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 VAX1Q5SQQ9 334 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 ZNF343Q6P1L6 599 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 GPR141Q7Z602 305 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 NECAP1Q8NC96 275 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 ADAD2Q8NCV1 583 aaKnown RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 GPX8Q8TED1 209 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 DLX4Q92988 240 aaPredicted RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 OR4C12Q96R67 309 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 B9D2Q9BPU9 175 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 BCL7BQ9BQE9 202 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 FAM212BQ9NTI7 297 aaPredicted RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
SEC13-204ENST00000397099 PEF1Q9UBV8 284 aaKnown RBP10.75□□□□□ -0.69
SEC13-204ENST00000397099 MEIS3P1A6NDR6 274 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 CYB5BO43169 146 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 SAP30O75446 220 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 EIF4EP06730 217 aaKnown RBP10.74□□□□□ -0.69
SEC13-204ENST00000397099 SMIM18P0DKX4 95 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 PTHLHP12272 177 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 HIST1H1BP16401 226 aaKnown RBP10.74□□□□□ -0.69
SEC13-204ENST00000397099 RPL27AP46776 148 aaKnown RBP10.74□□□□□ -0.69
SEC13-204ENST00000397099 RFX2P48378 723 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 SLURP1P55000 103 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 GPR107Q5VW38 600 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 THOC7Q6I9Y2 204 aaKnown RBP10.74□□□□□ -0.69
SEC13-204ENST00000397099 C11orf87Q6NUJ2 197 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 ZNF818PQ6ZRF7 136 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 TMEM17Q86X19 198 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 ZNF2Q9BSG1 426 aaPredicted RBP10.74□□□□□ -0.69
SEC13-204ENST00000397099 SLC2A9Q9NRM0 540 aa10.74□□□□□ -0.69
SEC13-204ENST00000397099 TRBV9A0A0B4J1U6 114 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 TNFSF12O43508 249 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 ZNF735P0CB33 412 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 NHLRC4P0CG21 123 aaPredicted RBP10.73□□□□□ -0.69
SEC13-204ENST00000397099 HLA-GP17693 338 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 ELK1P19419 428 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 TBPP20226 339 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 F2RP25116 425 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 GNRHRP30968 328 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 BRWD1-AS2P59051 145 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 ERVK-16P61578 105 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 TSPAN5P62079 268 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 ATP5G2Q06055 141 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 AADACL3Q5VUY0 350 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 OR4A47Q6IF82 309 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 HSD17B13Q7Z5P4 300 aaPredicted RBP10.73□□□□□ -0.69
SEC13-204ENST00000397099 VKORC1L1Q8N0U8 176 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 RABL2AQ9UBK7 228 aaPredicted RBP10.73□□□□□ -0.69
SEC13-204ENST00000397099 RABL2BQ9UNT1 228 aa10.73□□□□□ -0.69
SEC13-204ENST00000397099 FAM25AB3EWG3 89 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 FAM25CB3EWG5 89 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 FAM25GB3EWG6 89 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 GPR31O00270 319 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 HPGDSO60760 199 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 PMP2P02689 132 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 CRYGCP07315 174 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 HRH1P35367 487 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 ALDH3B2P48448 385 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 RHOGP84095 191 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 KLF5Q13887 457 aaPredicted RBP10.72□□□□□ -0.69
SEC13-204ENST00000397099 LYSMD2Q8IV50 215 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 DMBX1Q8NFW5 382 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 OR51H1Q8NH63 302 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 RAB2BQ8WUD1 216 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 COMMD5Q9GZQ3 224 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 SIGLEC8Q9NYZ4 499 aa10.72□□□□□ -0.69
SEC13-204ENST00000397099 TEX22C9J3V5 150 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 PGLYRP1O75594 196 aaPredicted RBP10.71□□□□□ -0.69
SEC13-204ENST00000397099 FCER2P06734 321 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 HLA-DMAP28067 261 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 UCP3P55916 312 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 MRPS10P82664 201 aaKnown RBP10.71□□□□□ -0.69
SEC13-204ENST00000397099 RPEL1Q2QD12 228 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 KLK9Q2XQG4 91 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 SNX29P2Q8IUI4 249 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 SLC38A6Q8IZM9 456 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 DGCR14Q96DF8 476 aaKnown RBP10.71□□□□□ -0.69
SEC13-204ENST00000397099 AKIP1Q9NQ31 210 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 FKBP11Q9NYL4 201 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 THYN1Q9P016 225 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 PEMTQ9UBM1 199 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 KLK9Q9UKQ9 250 aa10.71□□□□□ -0.69
SEC13-204ENST00000397099 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
SEC13-204ENST00000397099 ANKRD34BA5PLL1 514 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms