RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 LY96Q9Y6Y9 160 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 CXorf1O96002 111 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 RPP30P78346 268 aaKnown RBP11.05□□□□□ -0.64
TRIM40-207ENST00000396581 AESQ08117 197 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
TRIM40-207ENST00000396581 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 ZNF718Q3SXZ3 478 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 RNFT1Q5M7Z0 435 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 Q6ZR03 302 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 GTF3C1Q12789 2109 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 TNFSF13O75888 250 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 SELEP16581 610 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 KITLGP21583 273 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 VDAC2P45880 294 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-207ENST00000396581 EDDM3BP56851 147 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 HTD2P86397 168 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 NHLH1Q02575 133 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 PSG7Q13046 419 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 DEFB109BQ30KR1 87 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 SPINK9Q5DT21 86 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 TCF23Q7RTU1 214 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 TMEM204Q9BSN7 226 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 PRRC2CQ9Y520 2896 aaKnown RBP11.05□□□□□ -0.64
TRIM40-207ENST00000396581 LAMA5O15230 3695 aa11.05□□□□□ -0.64
TRIM40-207ENST00000396581 RBMXL2O75526 392 aaKnown RBP11.04□□□□□ -0.64
TRIM40-207ENST00000396581 HPRT1P00492 218 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 CELA3BP08861 270 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 TPPP2P59282 170 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 FOXF2Q12947 444 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 C3AR1Q16581 482 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 ACP7Q6ZNF0 438 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 Q6ZWC4 215 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 SLC25A40Q8TBP6 338 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 MRGPRDQ8TDS7 321 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 TBX15Q96SF7 602 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 MGST2Q99735 147 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
TRIM40-207ENST00000396581 APC2O95996 2303 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 C9JCJ5 164 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 C15orf65H3BRN8 121 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 PROP1O75360 226 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 GRPP07492 148 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 DUTP33316 252 aaKnown RBP11.04□□□□□ -0.64
TRIM40-207ENST00000396581 Q0VG73 95 aa11.04□□□□□ -0.64
TRIM40-207ENST00000396581 PATZ1Q9HBE1 687 aaKnown RBP11.04□□□□□ -0.64
TRIM40-207ENST00000396581 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 TRAV17A0A0B4J275 112 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 RRHO14718 337 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 WNT9BO14905 357 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 ADH4P08319 380 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 LINC00205P59089 165 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
TRIM40-207ENST00000396581 TRAT1Q6PIZ9 186 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 C1orf159Q96HA4 380 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 ACACAQ13085 2346 aa11.03□□□□□ -0.64
TRIM40-207ENST00000396581 K7EN84 100 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 GFRA3O60609 400 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 BMP5P22003 454 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 SSTR5P35346 364 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 GABRA2P47869 451 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 LGALS4P56470 323 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 GAGE1Q13065 139 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 SDSLQ96GA7 329 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 DEFB127Q9H1M4 99 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.64
TRIM40-207ENST00000396581 YTHDF2Q9Y5A9 579 aaKnown RBP11.02□□□□□ -0.64
TRIM40-207ENST00000396581 TRGV10A0A0A0MS01 117 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 TRGV5A0A0B4J1U4 118 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 CRYABP02511 175 aaKnown RBP11.02□□□□□ -0.65
TRIM40-207ENST00000396581 MIC13Q5XKP0 118 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 Q8TCH9 128 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 PSG11Q9UQ72 335 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 ARL2-SNX15V9GYD0 113 aa11.02□□□□□ -0.65
TRIM40-207ENST00000396581 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 TRGV8A0A0C4DH27 118 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-207ENST00000396581 KLK10O43240 276 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 IGHG3P01860 377 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-207ENST00000396581 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-207ENST00000396581 AREGP15514 252 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 CRISP2P16562 243 aa11.01□□□□□ -0.65
TRIM40-207ENST00000396581 CBLN1P23435 193 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms